RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 MICALL1Q8N3F8 863 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 MCUQ8NE86 351 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 CLEC4CQ8WTT0 213 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 LRRC39Q96DD0 335 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 LPIN3Q9BQK8 851 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 MED10Q9BTT4 135 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 IKBKGQ9Y6K9 419 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 CLUHO75153 1309 aa11.72□□□□□ -0.53
CLPX-204ENST00000559152 HCRTO43612 131 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 GCATO75600 419 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 SUN1O94901 812 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 RARBP10826 455 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 CYBAP13498 195 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 RBL1P28749 1068 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 SSTR1P30872 391 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 SULT1E1P49888 294 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 RAB27AP51159 221 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 ADIGQ0VDE8 80 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 CRHR2Q13324 411 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 LACTB2Q53H82 288 aaPredicted RBP11.71□□□□□ -0.53
CLPX-204ENST00000559152 NUGGCQ68CJ6 796 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 CAPN12Q6ZSI9 719 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 OSTM1Q86WC4 334 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 DEFB106AQ8N104 65 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 FBF1Q8TES7 1133 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 FAM149B1Q96BN6 582 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 SENP8Q96LD8 212 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 ELAC2Q9BQ52 826 aaKnown RBP11.71□□□□□ -0.53
CLPX-204ENST00000559152 DHRS4Q9BTZ2 278 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 SENP6Q9GZR1 1112 aaPredicted RBP11.71□□□□□ -0.53
CLPX-204ENST00000559152 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
CLPX-204ENST00000559152 PDCD11Q14690 1871 aaKnown RBP11.71□□□□□ -0.53
CLPX-204ENST00000559152 TRPM7Q96QT4 1865 aa11.71□□□□□ -0.53
CLPX-204ENST00000559152 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 TCRBV7S3A2A0A539 114 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 CCT8L1PA6NM43 557 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 H3BRJ5 948 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 SNX3O60493 162 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 ZWINTO95229 277 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 LIG3P49916 1009 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 SARNPP82979 210 aaKnown RBP11.71□□□□□ -0.54
CLPX-204ENST00000559152 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.54
CLPX-204ENST00000559152 PKN2Q16513 984 aaKnown RBP11.71□□□□□ -0.54
CLPX-204ENST00000559152 WSCD1Q658N2 575 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 DSTYKQ6XUX3 929 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 CNPY4Q8N129 248 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 VPS52Q8N1B4 723 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 NT5C3BQ969T7 300 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 ZFP42Q96MM3 310 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 TGS1Q96RS0 853 aaKnown RBP11.71□□□□□ -0.54
CLPX-204ENST00000559152 SLC9A7Q96T83 725 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 PAFAH2Q99487 392 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 PNPLA8Q9NP80 782 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 ETNK2Q9NVF9 386 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 FZD10Q9ULW2 581 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 USP15Q9Y4E8 981 aaPredicted RBP11.71□□□□□ -0.54
CLPX-204ENST00000559152 PTCH2Q9Y6C5 1203 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 TEX264Q9Y6I9 313 aa11.71□□□□□ -0.54
CLPX-204ENST00000559152 MYADML2A6NDP7 307 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 H0YHG0 523 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 TRDMT1O14717 391 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 SEPT4O43236 478 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 CA12O43570 354 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 STK10O94804 968 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 TKTP29401 623 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 MLH1P40692 756 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 ELK3P41970 407 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 GAD2Q05329 585 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 ADCY1Q08828 1119 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 MPP2Q14168 576 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 DCAF6Q58WW2 860 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 HEATR6Q6AI08 1181 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 GDF6Q6KF10 455 aaPredicted RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 CXCL17Q6UXB2 119 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 QKIQ96PU8 341 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLPX-204ENST00000559152 SLC2A13Q96QE2 648 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 KCTD15Q96SI1 283 aaPredicted RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 POPDC2Q9HBU9 364 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 CNGB3Q9NQW8 809 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 RRN3Q9NYV6 651 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 CDH9Q9ULB4 789 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 SF3B1O75533 1304 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLPX-204ENST00000559152 ZNF623O75123 536 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 ASMTLO95671 621 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 SKIP12755 728 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 TFE3P19532 575 aaPredicted RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 TPSB2P20231 275 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 YY1P25490 414 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 PCSK1P29120 753 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 TM4SF4P48230 202 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 TPSAB1Q15661 275 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 MDH1BQ5I0G3 518 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms