RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 SFTPA1Q8IWL2 248 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 PHTF2Q8N3S3 785 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 MLKLQ8NB16 471 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 GAB3Q8WWW8 586 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 TFAP2BQ92481 460 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 HHIPQ96QV1 700 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 MED15Q96RN5 788 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 CLSTN2Q9H4D0 955 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 DEC1Q9P2X7 70 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.2
CSHL1-208ENST00000558609 ANTXRLA6NF34 631 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 AXIN1O15169 862 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 TULP3O75386 442 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 RPP40O75818 363 aaKnown RBP16.26■□□□□ 0.19
CSHL1-208ENST00000558609 KIR2DL1P43626 348 aaPredicted RBP16.26■□□□□ 0.19
CSHL1-208ENST00000558609 STILQ15468 1287 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 RSPO4Q2I0M5 234 aaPredicted RBP16.26■□□□□ 0.19
CSHL1-208ENST00000558609 CEP68Q76N32 757 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 RRAGAQ7L523 313 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 MIB1Q86YT6 1006 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 ARHGEF19Q8IW93 802 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 SCML4Q8N228 414 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 NAT16Q8N8M0 369 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 CNTNAP3BQ96NU0 1288 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 CNTNAP3Q9BZ76 1288 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 ULBP1Q9BZM6 244 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 INTS2Q9H0H0 1204 aaKnown RBP16.26■□□□□ 0.19
CSHL1-208ENST00000558609 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 MARK1Q9P0L2 795 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 CNTN6Q9UQ52 1028 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 ZNF510Q9Y2H8 683 aa16.26■□□□□ 0.19
CSHL1-208ENST00000558609 CACNG3O60359 315 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 LRP3O75074 770 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 KLKB1P03952 638 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 ZNF132P52740 706 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 KDSRQ06136 332 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 EFEMP1Q12805 493 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 NUDT18Q6ZVK8 323 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 RSRC2Q7L4I2 434 aaKnown RBP16.25■□□□□ 0.19
CSHL1-208ENST00000558609 CACNA2D4Q7Z3S7 1137 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 CCDC33Q8N5R6 958 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 FAM160A2Q8N612 972 aaPredicted RBP16.25■□□□□ 0.19
CSHL1-208ENST00000558609 IL17RCQ8NAC3 791 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
CSHL1-208ENST00000558609 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 SLC35F5Q8WV83 523 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 KREMEN1Q96MU8 473 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 ZSWIM1Q9BR11 485 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 DCLK3Q9C098 648 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 CNGB3Q9NQW8 809 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 RASAL2Q9UJF2 1139 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 STRIP2Q9ULQ0 834 aa16.25■□□□□ 0.19
CSHL1-208ENST00000558609 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.25■□□□□ 0.19
CSHL1-208ENST00000558609 TBC1D3BA6NDS4 549 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 TYRP14679 529 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 BRD2P25440 801 aaKnown RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 DGKEP52429 567 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 CRY1Q16526 586 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 EMC10Q5UCC4 262 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 IRF2BP1Q8IU81 584 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 ALLCQ8N6M5 410 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 TERB1Q8NA31 727 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 TSTD1Q8NFU3 115 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 NDRG1Q92597 394 aaKnown RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 LOXL4Q96JB6 756 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 CNOT6LQ96LI5 555 aaKnown RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 IPO9Q96P70 1041 aaKnown RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 XPO6Q96QU8 1125 aaKnown RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 BBS2Q9BXC9 721 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 PARD6AQ9NPB6 346 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 OLA1Q9NTK5 396 aaKnown RBP16.24■□□□□ 0.19
CSHL1-208ENST00000558609 MARCH2Q9P0N8 246 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 SPAG17Q6Q759 2223 aa16.24■□□□□ 0.19
CSHL1-208ENST00000558609 SDK1Q7Z5N4 2213 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 CACNA1BQ00975 2339 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 YJEFN3A6XGL0 299 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 E7ENQ6 273 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 NEDD8-MDP1E9PL57 170 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 GABBR2O75899 941 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 KLF8O95600 359 aaPredicted RBP16.23■□□□□ 0.19
CSHL1-208ENST00000558609 TIE1P35590 1138 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 BSPRYQ5W0U4 402 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 GRAMD4Q6IC98 578 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 PMF1Q6P1K2 205 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 RASSF3Q86WH2 238 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 SIX6OS1Q8N1H7 587 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 TXNDC5Q8NBS9 432 aaKnown RBP16.23■□□□□ 0.19
CSHL1-208ENST00000558609 ZC3H10Q96K80 434 aaKnown RBP16.23■□□□□ 0.19
CSHL1-208ENST00000558609 HSFY1Q96LI6 401 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 UBE2TQ9NPD8 197 aaPredicted RBP16.23■□□□□ 0.19
CSHL1-208ENST00000558609 DNAJC17Q9NVM6 304 aaKnown RBP16.23■□□□□ 0.19
CSHL1-208ENST00000558609 FBXO10Q9UK96 956 aa16.23■□□□□ 0.19
CSHL1-208ENST00000558609 STARD13Q9Y3M8 1113 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms