RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 RPL7AP62424 266 aaKnown RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 MTMR3Q13615 1198 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 HECTD3Q5T447 861 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 MSANTD2Q6P1R3 559 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 PHLDB2Q86SQ0 1253 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 CENPIQ92674 756 aaPredicted RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 C16orf45Q96MC5 204 aaPredicted RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 NACA2Q9H009 215 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 PIDD1Q9HB75 910 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 TRIM10Q9UDY6 481 aa12.95□□□□□ -0.34
TPM1-209ENST00000558072 MTCL1Q9Y4B5 1905 aaKnown RBP12.95□□□□□ -0.34
TPM1-209ENST00000558072 ZNF840PA6NDX5 716 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 CES2O00748 559 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 CCL16O15467 120 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 GABBR2O75899 941 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 ENDOD1O94919 500 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 RARGP13631 454 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 COMTP21964 271 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 FLT3P36888 993 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 SSR1P43307 286 aaKnown RBP12.94□□□□□ -0.34
TPM1-209ENST00000558072 SULT1E1P49888 294 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 EPHA5P54756 1037 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 COG7P83436 770 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 DLX2Q07687 328 aaPredicted RBP12.94□□□□□ -0.34
TPM1-209ENST00000558072 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 MEI1Q5TIA1 1274 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 CC2D1AQ6P1N0 951 aaPredicted RBP12.94□□□□□ -0.34
TPM1-209ENST00000558072 EP400NLQ6ZTU2 488 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 PDZD4Q76G19 769 aaPredicted RBP12.94□□□□□ -0.34
TPM1-209ENST00000558072 MAP7D3Q8IWC1 876 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 SLC35F6Q8N357 371 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 JOSD2Q8TAC2 188 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 KHSRPQ92945 711 aaKnown RBP eCLIP12.94□□□□□ -0.344e-9■□□□□ 9.5
TPM1-209ENST00000558072 NPY6RQ99463 290 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 SMOC2Q9H3U7 446 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 FAM204AQ9H8W3 233 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 PRDM16Q9HAZ2 1276 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.94□□□□□ -0.34
TPM1-209ENST00000558072 GMIPQ9P107 970 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 CHORDC1Q9UHD1 332 aaPredicted RBP12.94□□□□□ -0.34
TPM1-209ENST00000558072 DNAI1Q9UI46 699 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 DNMT3LQ9UJW3 386 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 TFR2Q9UP52 801 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 HBS1LQ9Y450 684 aaKnown RBP12.94□□□□□ -0.34
TPM1-209ENST00000558072 CAPN6Q9Y6Q1 641 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 C2orf16Q68DN1 1984 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
TPM1-209ENST00000558072 PRRC2BQ5JSZ5 2229 aaKnown RBP12.93□□□□□ -0.34
TPM1-209ENST00000558072 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 A0A1W2PQH9 124 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 TMEM110-MUSTN1A8MSY1 372 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 M0QYT0 321 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 TLR5O60602 858 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 TBX10O75333 385 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 GRAP2O75791 330 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 ABL1P00519 1130 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 CTNNA2P26232 953 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 RWDD2BP57060 319 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 NTHL1P78549 312 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 ITIH3Q06033 890 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 NT5DC3Q86UY8 548 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM1-209ENST00000558072 UNC45BQ8IWX7 931 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 EMC1Q8N766 993 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 TEKT4Q8WW24 435 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 NDRG1Q92597 394 aaKnown RBP12.93□□□□□ -0.34
TPM1-209ENST00000558072 RNF34Q969K3 372 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 RBM41Q96IZ5 413 aaKnown RBP12.93□□□□□ -0.34
TPM1-209ENST00000558072 PBKQ96KB5 322 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 NAP1L3Q99457 506 aaPredicted RBP12.93□□□□□ -0.34
TPM1-209ENST00000558072 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.93□□□□□ -0.34
TPM1-209ENST00000558072 HCFC1R1Q9NWW0 138 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 DDIT4Q9NX09 232 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 PCDHA3Q9Y5H8 950 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 REV3LO60673 3130 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 MYO9BQ13459 2157 aa12.93□□□□□ -0.34
TPM1-209ENST00000558072 TRANK1O15050 2925 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 GREB1Q4ZG55 1949 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 TRUB2O95900 331 aaKnown RBP12.92□□□□□ -0.34
TPM1-209ENST00000558072 APOEP02649 317 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 F11P03951 625 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 FOSL2P15408 326 aa12.92□□□□□ -0.34
TPM1-209ENST00000558072 GABRR2P28476 465 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms