RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 CHD7Q9P2D1 2997 aa21.26■□□□□ 0.99
SNRPA1-205ENST00000558036 ALPK3Q96L96 1907 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 TRIM66O15016 1216 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 DAPK3O43293 454 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 ERLIN1O75477 346 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 ENDOD1O94919 500 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 GJB5O95377 273 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 SOD2P04179 222 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 LAG3P18627 525 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 DNAJB2P25686 324 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 RDXP35241 583 aaKnown RBP21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 TMEM240Q5SV17 173 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 NUP93Q8N1F7 819 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 PIK3R5Q8WYR1 880 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 C8orf48Q96LL4 319 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 CCDC114Q96M63 670 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 NMUR1Q9HB89 426 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 DDIT4Q9NX09 232 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 NUDT5Q9UKK9 219 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 DNPEPQ9ULA0 475 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 UTP11Q9Y3A2 253 aaKnown RBP21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 MDM4O15151 490 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 MAGEA11P43364 429 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 YWHAGP61981 247 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 MTMR3Q13615 1198 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 CCNG2Q16589 344 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 SCD5Q86SK9 330 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 HNRNPLLQ8WVV9 542 aaKnown RBP21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 ZBTB9Q96C00 473 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 CLSTN3Q9BQT9 956 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 ZBED2Q9BTP6 218 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 FAM204AQ9H8W3 233 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 SPG21Q9NZD8 308 aa21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 ZMYND8Q9ULU4 1186 aaPredicted RBP21.25■□□□□ 0.99
SNRPA1-205ENST00000558036 PTPRSQ13332 1948 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 L1CAMP32004 1257 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 SLC8B1Q6J4K2 584 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 SPPL2BQ8TCT7 592 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 NCAPGQ9BPX3 1015 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 ERP44Q9BS26 406 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 ANLNQ9NQW6 1124 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 OSER1Q9NX31 292 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 MTMR10Q9NXD2 777 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 CDH23Q9H251 3354 aa21.24■□□□□ 0.99
SNRPA1-205ENST00000558036 A0A1W2PQH9 124 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 LIASO43766 372 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 ECEL1O95672 775 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 PECAM1P16284 738 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 TRIP13Q15645 432 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 BBS12Q6ZW61 710 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 PRUNE1Q86TP1 453 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 TAC4Q86UU9 113 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 MAP7D3Q8IWC1 876 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 SCML4Q8N228 414 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 RUBCNQ92622 972 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 KCTD15Q96SI1 283 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 MAK16Q9BXY0 300 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 C10orf88Q9H8K7 445 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 WDR6Q9NNW5 1121 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 FZD10Q9ULW2 581 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 I6L893 689 aaPredicted RBP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 HLTFQ14527 1009 aaKnown RBP eCLIP21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 PDK2Q15119 407 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 NPNTQ6UXI9 565 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 ACTL9Q8TC94 416 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 GIPC2Q8TF65 315 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 NEUROG2Q9H2A3 272 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 SNX24Q9Y343 169 aa21.23■□□□□ 0.99
SNRPA1-205ENST00000558036 PATJQ8NI35 1801 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 BHMG1C9JSJ3 638 aaPredicted RBP21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 FAM153BP0C7A2 387 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 HAPLN1P10915 354 aaPredicted RBP21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 GLUD2P49448 558 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 OTUD4Q01804 1114 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 DSG1Q02413 1049 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 KRT17Q04695 432 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 PPP1R7Q15435 360 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 DPYSL2Q16555 572 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 FAM153CQ494X1 144 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 ANKRD20A8PQ5CZ79 823 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 BTBD8Q5XKL5 378 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 DENND5BQ6ZUT9 1274 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 VPS52Q8N1B4 723 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 PCDH19Q8TAB3 1148 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 DQX1Q8TE96 717 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 AENQ8WTP8 325 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 RNF157Q96PX1 679 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 FAM153AQ9UHL3 310 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 EFR3BQ9Y2G0 817 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 BACE2Q9Y5Z0 518 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 FAM187AA6NFU0 413 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 ATF6P18850 670 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 TNFRSF8P28908 595 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 ECHS1P30084 290 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 BYSLQ13895 437 aaKnown RBP21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 DUPD1Q68J44 220 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 B4GALNT4Q76KP1 1039 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 PQLC3Q8N755 202 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 OXCT2Q9BYC2 517 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms