RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZFRQ96KR1 1074 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 KLF16Q9BXK1 252 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 STK33Q9BYT3 514 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 IRF2BPLQ9H1B7 796 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 HSD3B7Q9H2F3 369 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 OLA1Q9NTK5 396 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 LSM7Q9UK45 103 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 STRIP2Q9ULQ0 834 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 NDRG2Q9UN36 371 aaKnown RBP13.11□□□□□ -0.31
SLIRP-211ENST00000557623 PCDHGC3Q9UN70 934 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 FHOD1Q9Y613 1164 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
SLIRP-211ENST00000557623 SHISA7A6NL88 538 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 KRT9P35527 623 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 RPS9P46781 194 aaKnown RBP13.1□□□□□ -0.31
SLIRP-211ENST00000557623 SOX9P48436 509 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 RGS7P49802 495 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 PTPN5P54829 565 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 DAOAP59103 153 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 COG7P83436 770 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 UBXN1Q04323 297 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 LRRC32Q14392 662 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 PROX2Q3B8N5 592 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 FILIP1LQ4L180 1135 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 DENND1BQ6P3S1 775 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 DTWD2Q8NBA8 298 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 GOLGA1Q92805 767 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-211ENST00000557623 IER2Q9BTL4 223 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
SLIRP-211ENST00000557623 ST7Q9NRC1 585 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 DLGAP2Q9P1A6 1054 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 MTF2Q9Y483 593 aaPredicted RBP13.1□□□□□ -0.31
SLIRP-211ENST00000557623 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
SLIRP-211ENST00000557623 SART1O43290 800 aaKnown RBP13.09□□□□□ -0.31
SLIRP-211ENST00000557623 HRO43593 1189 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 TBX18O95935 607 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 IRF1P10914 325 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 CLCN1P35523 988 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 RPL34P49207 117 aaKnown RBP13.09□□□□□ -0.31
SLIRP-211ENST00000557623 SNX16P57768 344 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 SYCP1Q15431 976 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ZSCAN23Q3MJ62 389 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 DGKKQ5KSL6 1271 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 BSPRYQ5W0U4 402 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 HTR3DQ70Z44 454 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 APTXQ7Z2E3 356 aaKnown RBP13.09□□□□□ -0.31
SLIRP-211ENST00000557623 SLC47A2Q86VL8 602 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ADGRG2Q8IZP9 1017 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 NEK11Q8NG66 645 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 TRIM62Q9BVG3 475 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 GANQ9H2C0 597 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 LHX5Q9H2C1 402 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ACP6Q9NPH0 428 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 FAM207AQ9NSI2 230 aaPredicted RBP13.09□□□□□ -0.31
SLIRP-211ENST00000557623 RASAL2Q9UJF2 1139 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 NUDT5Q9UKK9 219 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 SIK3Q9Y2K2 1263 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
SLIRP-211ENST00000557623 ZDBF2Q9HCK1 2354 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
SLIRP-211ENST00000557623 YJEFN3A6XGL0 299 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 E7ENQ6 273 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 F8VZ95 297 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 PIK3R2O00459 728 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 TRDMT1O14717 391 aaKnown RBP13.08□□□□□ -0.32
SLIRP-211ENST00000557623 MDM4O15151 490 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 ADH1CP00326 375 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 GJA4P35212 333 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 POLR2FP61218 127 aaKnown RBP13.08□□□□□ -0.32
SLIRP-211ENST00000557623 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
SLIRP-211ENST00000557623 IQCB1Q15051 598 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 PON2Q15165 354 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 BHLHA9Q7RTU4 235 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 TMEM110Q86TL2 294 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 SYNPOQ8N3V7 929 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 PRSS33Q8NF86 280 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
SLIRP-211ENST00000557623 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 DCLK3Q9C098 648 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 MIS12Q9H081 205 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 LMAN1LQ9HAT1 526 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 RABGEF1Q9UJ41 708 aa13.08□□□□□ -0.32
SLIRP-211ENST00000557623 F5P12259 2224 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 GOLGA6L19H0YKK7 550 aa13.07□□□□□ -0.32
SLIRP-211ENST00000557623 LTFP02788 710 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms