RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ADRB1P08588 477 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 FAM90A15PP0C7V4 464 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 FAM90A14PP0C7W9 464 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 DRD1P21728 446 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 CST5P28325 142 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-212ENST00000557477 MAPK9P45984 424 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 PTPRRQ15256 657 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 LSM12Q3MHD2 195 aaKnown RBP5.33□□□□□ -1.56
PRPF39-212ENST00000557477 IGFL4Q6B9Z1 124 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 GRHL2Q6ISB3 625 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 MSANTD2Q6P1R3 559 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 PIK3AP1Q6ZUJ8 805 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 ANKRD18AQ8IVF6 992 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 CCDC117Q8IWD4 279 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-212ENST00000557477 NRSN1Q8IZ57 195 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 MCRS1Q96EZ8 462 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 PBKQ96KB5 322 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 NUDT22Q9BRQ3 303 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 DDX23Q9BUQ8 820 aaKnown RBP5.33□□□□□ -1.56
PRPF39-212ENST00000557477 ALG8Q9BVK2 526 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 C9orf78Q9NZ63 289 aaPredicted RBP5.33□□□□□ -1.56
PRPF39-212ENST00000557477 EHD3Q9NZN3 535 aa5.33□□□□□ -1.56
PRPF39-212ENST00000557477 LMTK3Q96Q04 1460 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 C1QTNF3-AMACRE9PGA6 284 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 EIF3FO00303 357 aaPredicted RBP5.32□□□□□ -1.56
PRPF39-212ENST00000557477 PRRG2O14669 202 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 SPRY2O43597 315 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 PPP6R2O75170 966 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 CER1O95813 267 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 NR2F6P10588 404 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 ZFXP17010 805 aaPredicted RBP5.32□□□□□ -1.56
PRPF39-212ENST00000557477 CTGFP29279 349 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 MCM5P33992 734 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 ADD2P35612 726 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 FOLR3P41439 243 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 POLE2P56282 527 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 EIF4A1P60842 406 aaKnown RBP5.32□□□□□ -1.56
PRPF39-212ENST00000557477 CUL4BQ13620 913 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 P3H1Q32P28 736 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 TRIM60Q495X7 471 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 ATPAF1Q5TC12 328 aaPredicted RBP5.32□□□□□ -1.56
PRPF39-212ENST00000557477 KIAA0895LQ68EN5 471 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 CYP26C1Q6V0L0 522 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 Q6ZNX1 250 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 RRAGAQ7L523 313 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 CTHRC1Q96CG8 243 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 RSPRY1Q96DX4 576 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 UBXN10Q96LJ8 280 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 PRR25Q96S07 402 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 MMRN2Q9H8L6 949 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 SAYSD1Q9NPB0 183 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 GABRQQ9UN88 632 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 UHRF1BP1LA0JNW5 1464 aa5.32□□□□□ -1.56
PRPF39-212ENST00000557477 CD109Q6YHK3 1445 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 KIAA0556O60303 1618 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 KIF28PB7ZC32 967 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 H0Y3Z8 333 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 PSMD9O00233 223 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 MPPED1O15442 326 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 FAM155BO75949 473 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 NXPH3O95157 252 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 TMEM225BP0DP42 221 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 JUPP14923 745 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 CD19P15391 556 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 ITPKBP27987 946 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 GKP32189 559 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 PDE1AP54750 535 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 E2F1Q01094 437 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 POU5F1BQ06416 359 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 BMPR2Q13873 1038 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 CSHL1Q14406 222 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 PTPAQ15257 358 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 AASDHQ4L235 1098 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-212ENST00000557477 ALFQ53S48 1182 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 Q6YL49 198 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 VRK3Q8IV63 474 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 FTSJ3Q8IY81 847 aaKnown RBP5.31□□□□□ -1.56
PRPF39-212ENST00000557477 LCORLQ8N3X6 602 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 LRRC71Q8N4P6 559 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 SPPL3Q8TCT6 385 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 CSGALNACT1Q8TDX6 532 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 RSC1A1Q92681 617 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 ZSCAN31Q96LW9 406 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-212ENST00000557477 DPCDQ9BVM2 203 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-212ENST00000557477 VPS16Q9H269 839 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 TAF1DQ9H5J8 278 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-212ENST00000557477 TRIM36Q9NQ86 728 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 SYBUQ9NX95 663 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 KIF17Q9P2E2 1029 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 NKX1-2Q9UD57 310 aaPredicted RBP5.31□□□□□ -1.56
PRPF39-212ENST00000557477 FEM1BQ9UK73 627 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 ASAP1Q9ULH1 1129 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 CNTN6Q9UQ52 1028 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 SH2B3Q9UQQ2 575 aa5.31□□□□□ -1.56
PRPF39-212ENST00000557477 NCANO14594 1321 aa5.3□□□□□ -1.56
PRPF39-212ENST00000557477 MAST3O60307 1309 aa5.3□□□□□ -1.56
PRPF39-212ENST00000557477 FER1L4A9Z1Z3 1794 aa5.3□□□□□ -1.56
PRPF39-212ENST00000557477 KDM5BQ9UGL1 1544 aa5.3□□□□□ -1.56
PRPF39-212ENST00000557477 A8MVJ9 347 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms