RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ZNF844Q08AG5 666 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 STK3Q13188 491 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 GPS2Q13227 327 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 MCMDC2Q4G0Z9 681 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF362Q5T0B9 420 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ADALQ6DHV7 355 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 CXorf57Q6NSI4 855 aaKnown RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 FAM173BQ6P4H8 233 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 FBXO38Q6PIJ6 1188 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 C11orf57Q6ZUT1 292 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 EPM2AIP1Q7L775 607 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 DHX40Q8IX18 779 aaKnown RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 FBXL16Q8N461 479 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 SLC44A3Q8N4M1 653 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 MNS1Q8NEH6 495 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ENGASEQ8NFI3 743 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 KLHDC4Q8TBB5 520 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 DIS3LQ8TF46 1054 aaKnown RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 TMEM125Q96AQ2 219 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF274Q96GC6 653 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 CGRRF1Q99675 332 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 SDF4Q9BRK5 362 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 AGXT2Q9BYV1 514 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 R3HDMLQ9H3Y0 253 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 RIOX1Q9H6W3 641 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ANLNQ9NQW6 1124 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 HELLSQ9NRZ9 838 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 TBCCD1Q9NVR7 557 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 PNPOQ9NVS9 261 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 GEMIN8Q9NWZ8 242 aaKnown RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 SIDT1Q9NXL6 827 aaKnown RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 KCTD5Q9NXV2 234 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ZNHIT2Q9UHR6 403 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 RIPOR2Q9Y4F9 1068 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 COX11Q9Y6N1 276 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 AK9Q5TCS8 1911 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 COL5A2P05997 1499 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-246ENST00000557030 BCL9LQ86UU0 1499 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 ARFGEF2Q9Y6D5 1785 aa5.24□□□□□ -1.57
ATXN3-246ENST00000557030 TNS2Q63HR2 1409 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 E9PLN8 166 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 ZSCAN12O43309 604 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PROM1O43490 865 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 JAK2O60674 1132 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SUN1O94901 812 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SRGNP10124 158 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 KCNA2P16389 499 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 LPOP22079 712 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PLA2G5P39877 138 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 RARRES1P49788 294 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF135P52742 658 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TBX4P57082 545 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TUBB4BP68371 445 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 POU6F2P78424 691 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SIM1P81133 766 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 ELF2Q15723 593 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 JAKMIP3Q5VZ66 844 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TMCO3Q6UWJ1 677 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SLC30A10Q6XR72 485 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF589Q86UQ0 364 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PPP1R3BQ86XI6 285 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 FAM90A1Q86YD7 464 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 COLGALT2Q8IYK4 626 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TTC5Q8N0Z6 440 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TXLNBQ8N3L3 684 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 KBTBD3Q8NAB2 608 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PCSK9Q8NBP7 692 aaKnown RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PLBD2Q8NHP8 589 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PPP1R35Q8TAP8 253 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SLC35A4Q96G79 324 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PPP1R13BQ96KQ4 1090 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 MPHOSPH8Q99549 860 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 VKORC1Q9BQB6 163 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SIL1Q9H173 461 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 MRPL46Q9H2W6 279 aaKnown RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 BOLA2Q9H3K6 86 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 WDCPQ9H6R7 721 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PRDM11Q9NQV5 511 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 MRPS18AQ9NVS2 196 aaKnown RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 CFAP97Q9P2B7 532 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 GABBR1Q9UBS5 961 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 V9GYY5 206 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PALLDQ8WX93 1383 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TJP1Q07157 1748 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 NUP188Q5SRE5 1749 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 TOGARAM1Q9Y4F4 1720 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 LRP5O75197 1615 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PCDH11XQ9BZA7 1347 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 PCDH11YQ9BZA8 1340 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 SALL1Q9NSC2 1324 aa5.23□□□□□ -1.57
ATXN3-246ENST00000557030 LOC102724159A0A0B4J2E5 919 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 PRAMEF33A0A0G2JMD5 474 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 USP27XA6NNY8 438 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 EFCAB8A8MWE9 144 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TOR1BO14657 336 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 MGST3O14880 152 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TPD52L2O43399 206 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 PRAMEF10O60809 474 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 VPS4BO75351 444 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms