RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SLC22A12Q96S37 553 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 CCDC113Q9H0I3 377 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 EPN3Q9H201 632 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 OSBPL3Q9H4L5 887 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ZNF768Q9H5H4 540 aaKnown RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 PLEKHA5Q9HAU0 1116 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 CD248Q9HCU0 757 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ABI2Q9NYB9 513 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ANAPC2Q9UJX6 822 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 USP20Q9Y2K6 914 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 TAF6LQ9Y6J9 622 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 VWA8A3KMH1 1905 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 PCDH15Q96QU1 1955 aa6.16□□□□□ -1.42
ATXN3-245ENST00000556958 SPTBN1Q01082 2364 aaKnown RBP6.16□□□□□ -1.42
ATXN3-245ENST00000556958 ITPR2Q14571 2701 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 TLN1Q9Y490 2541 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 A0A1B0GTL3 188 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 NPC1O15118 1278 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 VILLO15195 856 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 HOXC11O43248 304 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 PRPF3O43395 683 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 LZTS3O60299 673 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 SYNCRIPO60506 623 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 TULP3O75386 442 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 NOL4O94818 638 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 IGLV3-19P01714 112 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CYP11A1P05108 521 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 GCFC2P16383 781 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 ACP1P24666 158 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CD27P26842 260 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 PI4KAP42356 2102 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 PPP3CCP48454 512 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 DUSP3P51452 185 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 RCAN1P53805 252 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 OXCT1P55809 520 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 DHX9Q08211 1270 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CBLBQ13191 982 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 NFE2Q16621 373 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 HS1BP3Q53T59 392 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 LY6G5CQ5SRR4 150 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 NT5DC1Q5TFE4 455 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 EGFLAMQ63HQ2 1017 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 KANSL1Q7Z3B3 1105 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 C12orf40Q86WS4 652 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 TMPRSS6Q8IU80 811 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 SRRM1Q8IYB3 904 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 SLFN12Q8IYM2 578 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CCDC116Q8IYX3 515 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 NAT16Q8N8M0 369 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CEP120Q8N960 986 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 SAP25Q8TEE9 199 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 SLC46A1Q96NT5 459 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 TSPAN18Q96SJ8 248 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 NAP1L4Q99733 375 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 HSD17B14Q9BPX1 270 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 ABCG4Q9H172 646 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 SLC6A17Q9H1V8 727 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CDT1Q9H211 546 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 ADNPQ9H2P0 1102 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 KCNMB3Q9NPA1 279 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CD93Q9NPY3 652 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 ASCL3Q9NQ33 180 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 CUEDC1Q9NWM3 386 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 EHD2Q9NZN4 543 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 TRPM5Q9NZQ8 1165 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 ATXN7L1Q9ULK2 861 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 UBQLN1Q9UMX0 589 aaKnown RBP6.15□□□□□ -1.42
ATXN3-245ENST00000556958 PCDHB1Q9Y5F3 818 aa6.15□□□□□ -1.42
ATXN3-245ENST00000556958 ABCA2Q9BZC7 2435 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 C2orf78A6NCI8 922 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 GRIK1P39086 918 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 CTSOP43234 321 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 BCAT1P54687 386 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 LILRA4P59901 499 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 RACK1P63244 317 aaKnown RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 SLC7A9P82251 487 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 MYL7Q01449 175 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 TSPY1Q01534 308 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 DDR2Q16832 855 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 SKIDA1Q1XH10 827 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ANO4Q32M45 955 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 FUT11Q495W5 492 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 FHL5Q5TD97 284 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 GRAMD4Q6IC98 578 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 Q6ZVU0 165 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 PTRH1Q86Y79 214 aaKnown RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 MIB1Q86YT6 1006 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ETFBKMTQ8IXQ9 262 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ARL14Q8N4G2 192 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 OR10T2Q8NGX3 314 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 SSC4DQ8WTU2 575 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ERLEC1Q96DZ1 483 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 XPO6Q96QU8 1125 aaKnown RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ACOX2Q99424 681 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 ACO2Q99798 780 aaKnown RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 EIF2AK1Q9BQI3 630 aaKnown RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 MRPL4Q9BYD3 311 aaKnown RBP6.14□□□□□ -1.43
ATXN3-245ENST00000556958 LRRC2Q9BYS8 371 aa6.14□□□□□ -1.43
ATXN3-245ENST00000556958 LNPKQ9C0E8 428 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms