RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ELF1P32519 619 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 SH3PXD2AQ5TCZ1 1133 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 MON1AQ86VX9 555 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 TCEAL8Q8IYN2 117 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 MRPL43Q8N983 215 aaKnown RBP24.76■■□□□ 1.55
SIX4-203ENST00000556952 RBM41Q96IZ5 413 aaKnown RBP24.76■■□□□ 1.55
SIX4-203ENST00000556952 MS4A14Q96JA4 679 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 TBCBQ99426 244 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 PRDM6Q9NQX0 595 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 NAALADL1Q9UQQ1 740 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 UNC80Q8N2C7 3258 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 CTAGE15A4D2H0 777 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 ENDOD1O94919 500 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 TRUB2O95900 331 aaKnown RBP24.76■■□□□ 1.55
SIX4-203ENST00000556952 CTAGE8P0CG41 777 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 PYGMP11217 842 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 GJC1P36383 396 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 ALDH1A3P47895 512 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 NRIP1P48552 1158 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 HDAC4P56524 1084 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 ITIH3Q06033 890 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 CTAGE6Q86UF2 777 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 CTAGE4Q8IX94 777 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 PGAP3Q96FM1 320 aaPredicted RBP24.76■■□□□ 1.55
SIX4-203ENST00000556952 TTLL2Q9BWV7 592 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 YIPF1Q9Y548 306 aa24.76■■□□□ 1.55
SIX4-203ENST00000556952 SLC38A8A6NNN8 435 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 PDE2AO00408 941 aaPredicted RBP24.75■■□□□ 1.55
SIX4-203ENST00000556952 ZRANB2O95218 330 aaKnown RBP eCLIP24.75■■□□□ 1.55
SIX4-203ENST00000556952 IL1R2P27930 398 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 PSEN1P49768 467 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 USP46P62068 366 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 ZNF211Q13398 564 aaPredicted RBP24.75■■□□□ 1.55
SIX4-203ENST00000556952 SYPL2Q5VXT5 272 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 GPR152Q8TDT2 470 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 FBXO32Q969P5 355 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 KLHL5Q96PQ7 755 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 IGFLR1Q9H665 355 aa24.75■■□□□ 1.55
SIX4-203ENST00000556952 PRRG1O14668 218 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 SLC34A2O95436 690 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 KRT1P04264 644 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 TFE3P19532 575 aaPredicted RBP24.74■■□□□ 1.55
SIX4-203ENST00000556952 RDXP35241 583 aaKnown RBP24.74■■□□□ 1.55
SIX4-203ENST00000556952 CETN2P41208 172 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 SKIV2LQ15477 1246 aaKnown RBP24.74■■□□□ 1.55
SIX4-203ENST00000556952 ODF2Q5BJF6 829 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 OTUD1Q5VV17 481 aaPredicted RBP24.74■■□□□ 1.55
SIX4-203ENST00000556952 BTBD8Q5XKL5 378 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 RCOR2Q8IZ40 523 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 STKLD1Q8NE28 680 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 MYRIPQ8NFW9 859 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 TEKT4Q8WW24 435 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 ADAM33Q9BZ11 813 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 TLE6Q9H808 572 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 ZWILCHQ9H900 591 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 PCSK1NQ9UHG2 260 aa24.74■■□□□ 1.55
SIX4-203ENST00000556952 MTCL1Q9Y4B5 1905 aaKnown RBP24.73■■□□□ 1.55
SIX4-203ENST00000556952 M0QYT0 321 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 LINC01565O15544 149 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 CSH1P0DML2 217 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 CSH2P0DML3 217 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 COPS2P61201 443 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 RBM10P98175 930 aaKnown RBP24.73■■□□□ 1.55
SIX4-203ENST00000556952 PLD1Q13393 1074 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 VEPH1Q14D04 833 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 DUSP6Q16828 381 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 BOLA3Q53S33 107 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 ZFYVE27Q5T4F4 411 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 TXNRD3NBQ6F5E7 133 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 SCD5Q86SK9 330 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 SLC7A14Q8TBB6 771 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 GIPC2Q8TF65 315 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 EDEM1Q92611 657 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 SLITRK1Q96PX8 696 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 PEBP4Q96S96 227 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 TLR8Q9NR97 1041 aaKnown RBP24.73■■□□□ 1.55
SIX4-203ENST00000556952 TMEM51Q9NW97 253 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 INSL5Q9Y5Q6 135 aa24.73■■□□□ 1.55
SIX4-203ENST00000556952 A0A1W2PQH9 124 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 MDM4O15151 490 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 TGM5O43548 720 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 C1RP00736 705 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 FGGP02679 453 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 DEUP1Q05D60 604 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 CYP4V2Q6ZWL3 525 aaPredicted RBP24.72■■□□□ 1.55
SIX4-203ENST00000556952 OVCA2Q8WZ82 227 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 CLIC5Q9NZA1 410 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 GMIPQ9P107 970 aa24.72■■□□□ 1.55
SIX4-203ENST00000556952 EFCAB8A8MWE9 144 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 F9P00740 461 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 TUBB4BP68371 445 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 MTMR3Q13615 1198 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 SMTNL2Q2TAL5 461 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 RAB6CQ53S08 254 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 SCYL2Q6P3W7 929 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 LILRA6Q6PI73 481 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 CCDC50Q8IVM0 306 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 PDZD8Q8NEN9 1154 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 SPATA4Q8NEY3 305 aa24.71■■□□□ 1.55
SIX4-203ENST00000556952 CMASQ8NFW8 434 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms