RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 E7ENQ6 273 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 M0QYV0 167 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 TRIM24O15164 1050 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 CACNG3O60359 315 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 ATG13O75143 517 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 TULP3O75386 442 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 KAT7O95251 611 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 FGFR1OPO95684 399 aaKnown RBP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 KLKB1P03952 638 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 RALAP11233 206 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 HNRNPLP14866 589 aaKnown RBP eCLIP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 SEC13P55735 322 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 SLC8A3P57103 927 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 DAOAP59103 153 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 ZNF445P59923 1031 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 TYRO3Q06418 890 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 EFEMP1Q12805 493 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 DMC1Q14565 340 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 CNGA2Q16280 664 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 STX1AQ16623 288 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 PMF1Q6P1K2 205 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 GJB7Q6PEY0 223 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 TADA2BQ86TJ2 420 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 ARHGAP18Q8N392 663 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 TERB1Q8NA31 727 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 SLC35F5Q8WV83 523 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 SECISBP2LQ93073 1101 aaKnown RBP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 CDK5RAP1Q96SZ6 601 aaKnown RBP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 PNKPQ96T60 521 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 LSM7Q9UK45 103 aaKnown RBP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 AJAP1Q9UKB5 411 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-224ENST00000556737 HCN2Q9UL51 889 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 SLC8A2Q9UPR5 921 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 PLXND1Q9Y4D7 1925 aa10.83□□□□□ -0.68
SHMT2-224ENST00000556737 GTPBP10A4D1E9 387 aaKnown RBP10.82□□□□□ -0.68
SHMT2-224ENST00000556737 BECN2A8MW95 431 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-224ENST00000556737 APODP05090 189 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 SLC9A1P19634 815 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 TGM1P22735 817 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 CNR2P34972 360 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 GRIA2P42262 883 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 RPL34P49207 117 aaKnown RBP10.82□□□□□ -0.68
SHMT2-224ENST00000556737 RGS7P49802 495 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 GOLGA8FQ08AF8 430 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 GOLGA8DPQ0D2H9 430 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 GSE1Q14687 1217 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 STILQ15468 1287 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 LPAL2Q16609 132 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 C2orf27AQ580R0 203 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 MIIPQ5JXC2 388 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 LAIR1Q6GTX8 287 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 DPY19L2P1Q6NXN4 242 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 RBM43Q6ZSC3 357 aaKnown RBP10.82□□□□□ -0.68
SHMT2-224ENST00000556737 FAM217AQ8IXS0 508 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 KIAA2013Q8IYS2 634 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 CAMKK1Q8N5S9 505 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 NAT16Q8N8M0 369 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 IL17RCQ8NAC3 791 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 CLEC4CQ8WTT0 213 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 CRACR2AQ9BSW2 395 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 THAP9Q9H5L6 903 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 LRRC4Q9HBW1 653 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 PARD6AQ9NPB6 346 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 ZDHHC4Q9NPG8 344 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 ACP6Q9NPH0 428 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 MARCH2Q9P0N8 246 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 NCDNQ9UBB6 729 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 MMP17Q9ULZ9 603 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 SPTBN4Q9H254 2564 aa10.82□□□□□ -0.68
SHMT2-224ENST00000556737 GOLGA6L3A6NEY3 463 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 NEDD8-MDP1E9PL57 170 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 SGK1O00141 431 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 GFRA2O00451 464 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 PIK3R2O00459 728 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 ADAM23O75077 832 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 APBB3O95704 486 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 PENKP01210 267 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 HMBSP08397 361 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 TYRP14679 529 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 ERCC5P28715 1186 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 CORO1AP31146 461 aaKnown RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 GPD2P43304 727 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 TNFRSF4P43489 277 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 MRPS21P82921 87 aaKnown RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 SIM2Q14190 667 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 TRIP4Q15650 581 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-224ENST00000556737 MEA1Q16626 185 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 MAN2A1Q16706 1144 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 ANO4Q32M45 955 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 EMC10Q5UCC4 262 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 FYB2Q5VWT5 728 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 BSPRYQ5W0U4 402 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 MSANTD2Q6P1R3 559 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 DENND1BQ6P3S1 775 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 TMEM92Q6UXU6 159 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 GBP6Q6ZN66 633 aa10.81□□□□□ -0.68
SHMT2-224ENST00000556737 PRR23BQ6ZRT6 265 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms