RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 DENND1BQ6P3S1 775 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 ZC3H14Q6PJT7 736 aaKnown RBP12.08□□□□□ -0.48
SLIRP-206ENST00000556375 Q6ZNB5 142 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 ANKRD20A12PQ8NF67 263 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 STK32AQ8WU08 396 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 NDRG1Q92597 394 aaKnown RBP12.08□□□□□ -0.48
SLIRP-206ENST00000556375 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
SLIRP-206ENST00000556375 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
SLIRP-206ENST00000556375 VPS16Q9H269 839 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 FBRSL1Q9HCM7 1045 aaKnown RBP12.08□□□□□ -0.48
SLIRP-206ENST00000556375 ACP6Q9NPH0 428 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 PLCB1Q9NQ66 1216 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 SPHK2Q9NRA0 654 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
SLIRP-206ENST00000556375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 SART1O43290 800 aaKnown RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 RNF40O75150 1001 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 LTFP02788 710 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 TDGF1P13385 188 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 UCHL3P15374 230 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 ZNF18P17022 549 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 PTMSP20962 102 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 ACADSBP45954 432 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 CXCL12P48061 93 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 SATB1Q01826 763 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 CSTF1Q05048 431 aaKnown RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 GAD2Q05329 585 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 PTK2Q05397 1052 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 NCAPHQ15003 741 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 FKBP15Q5T1M5 1219 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 AOPEPQ8N6M6 819 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 RNF139Q8WU17 664 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 EZH1Q92800 747 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 GOLGA1Q92805 767 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 NELL1Q92832 810 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 PLD4Q96BZ4 506 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 BPIFA3Q9BQP9 254 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 NAA15Q9BXJ9 866 aaKnown RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 FAM126AQ9BYI3 521 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 DCLK3Q9C098 648 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 ST7Q9NRC1 585 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 LIMA1Q9UHB6 759 aaKnown RBP12.07□□□□□ -0.48
SLIRP-206ENST00000556375 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 ZNF510Q9Y2H8 683 aa12.07□□□□□ -0.48
SLIRP-206ENST00000556375 SLC12A8A0AV02 714 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 LGALS16A8MUM7 142 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 CHURC1-FNTBB4DL54 471 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 FOXN3O00409 490 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 PIK3R2O00459 728 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 PNMA6AP0CW24 399 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 CORO1AP31146 461 aaKnown RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 MRE11P49959 708 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 COPB1P53618 953 aaKnown RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 BPIFB4P59827 614 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 PDCLQ13371 301 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 DRAP1Q14919 205 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 TSSK4Q6SA08 328 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 C12orf40Q86WS4 652 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 ETFBKMTQ8IXQ9 262 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 CLEC4CQ8WTT0 213 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 EDEM1Q92611 657 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 MIS12Q9H081 205 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 GANQ9H2C0 597 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 HSD3B7Q9H2F3 369 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 MARK1Q9P0L2 795 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 CYTH4Q9UIA0 394 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 HBS1LQ9Y450 684 aaKnown RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 PCDHGA2Q9Y5H1 932 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 R4GN57 208 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 RIF1Q5UIP0 2472 aaKnown RBP12.06□□□□□ -0.48
SLIRP-206ENST00000556375 FAM186AA6NE01 2351 aa12.06□□□□□ -0.48
SLIRP-206ENST00000556375 E5RJQ4 531 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 F8VZ95 297 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 CACNG3O60359 315 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 ATG13O75143 517 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 KLKB1P03952 638 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 HMBSP08397 361 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 CLCN1P35523 988 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 NRLP54845 237 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 TRIP4Q15650 581 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-206ENST00000556375 ANO4Q32M45 955 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 PREPLQ4J6C6 727 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-206ENST00000556375 PKN3Q6P5Z2 889 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 TMEM110Q86TL2 294 aa12.05□□□□□ -0.48
SLIRP-206ENST00000556375 SLC47A2Q86VL8 602 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms