RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 STAM2O75886 525 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 APOL3O95236 402 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 LGALS2P05162 132 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CYP21A2P08686 494 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 SMIM10L2AP0DMW4 78 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 SMIM10L2BP0DMW5 78 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CALM1P0DP23 149 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CALM2P0DP24 149 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CALM3P0DP25 149 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 HK1P19367 917 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 UBA1P22314 1058 aaKnown RBP4.4□□□□□ -1.71
ATXN3-240ENST00000556339 GTF2F1P35269 517 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATXN3-240ENST00000556339 ANTXR2P58335 489 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 IGBP1P78318 339 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 DEFB103AP81534 67 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 SP2Q02086 613 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 GPM6BQ13491 265 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 KRT32Q14532 448 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 DHX8Q14562 1220 aaKnown RBP4.4□□□□□ -1.71
ATXN3-240ENST00000556339 PTPROQ16827 1216 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 HSDL1Q3SXM5 330 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 TIGD2Q4W5G0 525 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 NAALADL2Q58DX5 795 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 TRIM61Q5EBN2 209 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 ATL3Q6DD88 541 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 XRRA1Q6P2D8 792 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 USP17L6PQ6QN14 398 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 SASS6Q6UVJ0 657 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 METTL7BQ6UX53 244 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.4□□□□□ -1.71
ATXN3-240ENST00000556339 RAB11FIP4Q86YS3 637 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 VRK3Q8IV63 474 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 ZSWIM2Q8NEG5 633 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 DBF4BQ8NFT6 615 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 IL31RAQ8NI17 732 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CPT1CQ8TCG5 803 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 GDPD5Q8WTR4 605 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 SEPT1Q8WYJ6 367 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 ST8SIA2Q92186 375 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 VOPP1Q96AW1 172 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CDHR1Q96JP9 859 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 DEPDC7Q96QD5 511 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 UIMC1Q96RL1 719 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 MYL10Q9BUA6 226 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 LSG1Q9H089 658 aaKnown RBP4.4□□□□□ -1.71
ATXN3-240ENST00000556339 RNPEPQ9H4A4 650 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 AZI2Q9H6S1 392 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CYP4F11Q9HBI6 524 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 PTGFRNQ9P2B2 879 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 PACSIN3Q9UKS6 424 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 SMC3Q9UQE7 1217 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 EYSQ5T1H1 3165 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 BDP1A6H8Y1 2624 aa4.4□□□□□ -1.71
ATXN3-240ENST00000556339 CHD9Q3L8U1 2897 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MICAL3Q7RTP6 2002 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 DOCK5Q9H7D0 1870 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 hCG_1642624A0A1W2PR95 340 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 SYCE3A1L190 88 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 LCHNA4D1U4 455 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 LINC01553A4QN01 128 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 EPOPA6NHQ4 379 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 HAS3O00219 553 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 SCAF4O95104 1147 aaKnown RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 CSPG5O95196 566 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 GJB5O95377 273 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 F2P00734 622 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 CXCL10P02778 98 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 ITGB1P05556 798 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 GYPEP15421 78 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 RXRAP19793 462 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 POU3F3P20264 500 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MARK3P27448 753 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 BCAR1P56945 870 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 ERVK-21P61565 698 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 AKAP17AQ02040 695 aaKnown RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 SPOUT1Q5T280 376 aaKnown RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 LRRC55Q6ZSA7 311 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 HEATR3Q7Z4Q2 680 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 BMP8AQ7Z5Y6 402 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 FGD2Q7Z6J4 655 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 CLEC14AQ86T13 490 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 SERINC5Q86VE9 423 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 CMTM4Q8IZR5 234 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 FANCBQ8NB91 859 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MDGA1Q8NFP4 955 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 GPR150Q8NGU9 434 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MAP4K1Q92918 833 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 NKD2Q969F2 451 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 LENG9Q96B70 501 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 FAM122AQ96E09 287 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MTMR8Q96EF0 704 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 SDF4Q9BRK5 362 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 C16orf70Q9BSU1 422 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MLST8Q9BVC4 326 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 C1QTNF1Q9BXJ1 281 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 MRPL4Q9BYD3 311 aaKnown RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 LRRC2Q9BYS8 371 aa4.39□□□□□ -1.71
ATXN3-240ENST00000556339 IFIH1Q9BYX4 1025 aaKnown RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 FAM49AQ9H0Q0 323 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-240ENST00000556339 SMARCAD1Q9H4L7 1026 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms