RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 HMGB4Q8WW32 186 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 WBP2Q969T9 261 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 CEP63Q96MT8 703 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 ARID3AQ99856 593 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 UBXN6Q9BZV1 441 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 DUSP15Q9H1R2 295 aaPredicted RBP16.22■□□□□ 0.19
SNX6-205ENST00000555648 LRRC4Q9HBW1 653 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 SPTBN4Q9H254 2564 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 TCRBV21S2A2A0A5A6 115 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 GDF9O60383 454 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 CAVIN2O95810 425 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 TYRP14679 529 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 KIR2DL1P43626 348 aaPredicted RBP16.21■□□□□ 0.19
SNX6-205ENST00000555648 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
SNX6-205ENST00000555648 MCCD1P59942 119 aaPredicted RBP16.21■□□□□ 0.19
SNX6-205ENST00000555648 EFEMP1Q12805 493 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 GOLGA7BQ2TAP0 167 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 TMEM92Q6UXU6 159 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 SPATA20Q8TB22 786 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 BHMTQ93088 406 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
SNX6-205ENST00000555648 DCLK3Q9C098 648 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 ZDHHC4Q9NPG8 344 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 COQ4Q9Y3A0 265 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 USP3Q9Y6I4 520 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 PTPRDP23468 1912 aa16.21■□□□□ 0.19
SNX6-205ENST00000555648 GREB1Q4ZG55 1949 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 ANAPC1Q9H1A4 1944 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 BICDL2A1A5D9 508 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 HMBSP08397 361 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 CHKAP35790 457 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 DHPSP49366 369 aaPredicted RBP16.2■□□□□ 0.18
SNX6-205ENST00000555648 DGKGP49619 791 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 TKTL1P51854 596 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 BCAT1P54687 386 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 MESP2Q0VG99 397 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 LPCAT2Q7L5N7 544 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 CYP2U1Q7Z449 544 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 SCD5Q86SK9 330 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 ZC3H3Q8IXZ2 948 aaKnown RBP16.2■□□□□ 0.18
SNX6-205ENST00000555648 ELOA2Q8IYF1 753 aaPredicted RBP16.2■□□□□ 0.18
SNX6-205ENST00000555648 CHPFQ8IZ52 775 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 SIX6OS1Q8N1H7 587 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 ZNF276Q8N554 614 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 SLC35C1Q96A29 364 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 NT5C1BQ96P26 610 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 MARK1Q9P0L2 795 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 MARCH2Q9P0N8 246 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 MAN1B1Q9UKM7 699 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 TSPAN16Q9UKR8 245 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 KIAA1257Q9ULG3 409 aa16.2■□□□□ 0.18
SNX6-205ENST00000555648 DMDP11532 3685 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 VPS13AQ96RL7 3174 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 SLC12A8A0AV02 714 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 BCLAF3A2AJT9 711 aaKnown RBP16.19■□□□□ 0.18
SNX6-205ENST00000555648 ANTXRLA6NF34 631 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 XPO1O14980 1071 aaKnown RBP16.19■□□□□ 0.18
SNX6-205ENST00000555648 CACNG3O60359 315 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 STC2O76061 302 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 ZBED1O96006 694 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 CYBBP04839 570 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 VDRP11473 427 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 HOXB2P14652 356 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 NTSR1P30989 418 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 FMO5P49326 533 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 LIMK1P53667 647 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 YWHAGP61981 247 aaKnown RBP eCLIP16.19■□□□□ 0.18
SNX6-205ENST00000555648 BST2Q10589 180 aaKnown RBP16.19■□□□□ 0.18
SNX6-205ENST00000555648 PPM1JQ5JR12 505 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 PLA2G2CQ5R387 149 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 PMS2CLQ68D20 193 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 RNF43Q68DV7 783 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 PHTF2Q8N3S3 785 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 NELFBQ8WX92 580 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 SMOC1Q9H4F8 434 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 PCDHB4Q9Y5E5 795 aa16.19■□□□□ 0.18
SNX6-205ENST00000555648 KHNYNO15037 678 aaKnown RBP16.18■□□□□ 0.18
SNX6-205ENST00000555648 GREM1O60565 184 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 ADAM23O75077 832 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 CORO1AP31146 461 aaKnown RBP16.18■□□□□ 0.18
SNX6-205ENST00000555648 WASP42768 502 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 PDE4CQ08493 712 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 STPG1Q5TH74 334 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 Q6ZNB5 142 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 PPM1KQ8N3J5 372 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 RLN3Q8WXF3 142 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 ULBP1Q9BZM6 244 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 OLA1Q9NTK5 396 aaKnown RBP16.18■□□□□ 0.18
SNX6-205ENST00000555648 PLK2Q9NYY3 685 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 STARD13Q9Y3M8 1113 aa16.18■□□□□ 0.18
SNX6-205ENST00000555648 BIN1O00499 593 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 TRIM24O15164 1050 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 FGFR1OPO95684 399 aaKnown RBP16.17■□□□□ 0.18
SNX6-205ENST00000555648 GNA14O95837 355 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 SETSIPP0DME0 302 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 HNRNPLP14866 589 aaKnown RBP eCLIP16.17■□□□□ 0.186e-14■□□□□ 8.8
SNX6-205ENST00000555648 BCKDHBP21953 392 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 HARS2P49590 506 aaKnown RBP16.17■□□□□ 0.18
SNX6-205ENST00000555648 E2F5Q15329 346 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms