RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 M0QYT0 321 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 RFXAPO00287 272 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ZNF500O60304 480 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 CKMP06732 381 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 RARGP13631 454 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 PCK1P35558 622 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 GJC1P36383 396 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ATP5C1P36542 298 aaKnown RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 FLT3P36888 993 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 USP46P62068 366 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ETF1P62495 437 aaKnown RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ITIH3Q06033 890 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 NME3Q13232 169 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 NNTQ13423 1086 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 MTMR3Q13615 1198 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 RPS6KA1Q15418 735 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 EFHC2Q5JST6 749 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ACBD5Q5T8D3 534 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 MSANTD2Q6P1R3 559 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 SCYL2Q6P3W7 929 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 KLHDC10Q6PID8 442 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 POLNQ7Z5Q5 900 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 DDX42Q86XP3 938 aaKnown RBP eCLIP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 JOSD2Q8TAC2 188 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ZNF592Q92610 1267 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 PIWIL1Q96J94 861 aaKnown RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 RIPOR3Q96MK2 946 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 TBCBQ99426 244 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 ATXN3LQ9H3M9 355 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 IL37Q9NZH6 218 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 MARCH2Q9P0N8 246 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 COX16Q9P0S2 106 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 CHORDC1Q9UHD1 332 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-220ENST00000555634 DNAI1Q9UI46 699 aa11.68□□□□□ -0.54
SHMT2-220ENST00000555634 CHD9Q3L8U1 2897 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 SOBPA7XYQ1 873 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 RFPL2O75678 378 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 GJB6O95452 261 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 TRUB2O95900 331 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 FTCDO95954 541 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 TNNT1P13805 278 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 COMTP21964 271 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 CCR1P32246 355 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 AVPR1AP37288 418 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 HYAL1Q12794 435 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 EFEMP1Q12805 493 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 BRMS1LQ5PSV4 323 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 RARS2Q5T160 578 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 SEL1L2Q5TEA6 688 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 SNX30Q5VWJ9 437 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 NUGGCQ68CJ6 796 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 TAC4Q86UU9 113 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 MIB1Q86YT6 1006 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 CCDC50Q8IVM0 306 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 MAP7D3Q8IWC1 876 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 SLC35F6Q8N357 371 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 ZNF276Q8N554 614 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 DQX1Q8TE96 717 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 PGAP3Q96FM1 320 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 RBM41Q96IZ5 413 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 BTBD6Q96KE9 485 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 CLDND1Q9NY35 253 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 LSM7Q9UK45 103 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 NAALADL1Q9UQQ1 740 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 TLR6Q9Y2C9 796 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 HBS1LQ9Y450 684 aaKnown RBP11.67□□□□□ -0.54
SHMT2-220ENST00000555634 ALG6Q9Y672 507 aa11.67□□□□□ -0.54
SHMT2-220ENST00000555634 TYW5A2RUC4 315 aaKnown RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 ZNF840PA6NDX5 716 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 KRT1P04264 644 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 RHOP08100 348 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 MBL2P11226 248 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 FOSL2P15408 326 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 HMGA1P17096 107 aaKnown RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 TCP1P17987 556 aaKnown RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 POU3F3P20264 500 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 CTNNA1P35221 906 aaKnown RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 HARS2P49590 506 aaKnown RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 COG7P83436 770 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 KRT81Q14533 505 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 GRIN2CQ14957 1233 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 TAF5Q15542 800 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 CCDC14Q49A88 953 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 CCDC181Q5TID7 509 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 LRRC38Q5VT99 294 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-220ENST00000555634 TMC5Q6UXY8 1006 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 SYT10Q6XYQ8 523 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 TMEM184AQ6ZMB5 413 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 NYAP1Q6ZVC0 841 aa11.66□□□□□ -0.54
SHMT2-220ENST00000555634 PSTKQ8IV42 348 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms