RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 GREB1Q4ZG55 1949 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 A0A1W2PQH9 124 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 LRRD1A4D1F6 860 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 KRIT1O00522 736 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 FYNP06241 537 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 ADH1AP07327 375 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 SPATA31D3P0C874 917 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 RARAP10276 462 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 ATF6P18850 670 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 IL1R2P27930 398 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 GBP1P32455 592 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 ATXN1P54253 815 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 HDAC4P56524 1084 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 PITX1P78337 314 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 TAF10Q12962 218 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 GPM6BQ13491 265 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 VEPH1Q14D04 833 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 LLGL1Q15334 1064 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 KCNT1Q5JUK3 1230 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 TEX35Q5T0J7 233 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 SPATA31D4Q6ZUB0 917 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 SPRED2Q7Z698 418 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 ADAT2Q7Z6V5 191 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 SCD5Q86SK9 330 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 MON1AQ86VX9 555 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 KCTD6Q8NC69 237 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 ADAM32Q8TC27 787 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 RNF139Q8WU17 664 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 CENPIQ92674 756 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 CEP295NLQ96MC4 621 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 PEBP4Q96S96 227 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 NMUR1Q9HB89 426 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 TLR9Q9NR96 1032 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 TLR8Q9NR97 1041 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 GPATCH2LQ9NWQ4 482 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 IL37Q9NZH6 218 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 MSRAQ9UJ68 235 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 YBX2Q9Y2T7 364 aaKnown RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 YIPF1Q9Y548 306 aa10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 V9GYY5 206 aaPredicted RBP10.07□□□□□ -0.8
HNRNPC-220ENST00000555585 ZNF638Q14966 1978 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 UQCRHLA0A096LP55 91 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 EFCAB8A8MWE9 144 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 C5orf67F2Z3F1 127 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 H0YGN5 161 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 GRM6O15303 877 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 TGM5O43548 720 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 TADA3O75528 432 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 ENDOD1O94919 500 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 F9P00740 461 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 UQCRHP07919 91 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 CSH1P0DML2 217 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 CSH2P0DML3 217 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 RALAP11233 206 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 KDELR1P24390 212 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 DNAJB1P25685 340 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 PBX2P40425 430 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 EPHB3P54753 998 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 CDH6P55285 790 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 COPS2P61201 443 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 ERVK-21P61565 698 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 TWF1Q12792 350 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 MMRN1Q13201 1228 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 PLD1Q13393 1074 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 KRT81Q14533 505 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 RAB30Q15771 203 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 BOLA3Q53S33 107 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 ERMARDQ5T6L9 678 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 KAZNQ674X7 775 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 MFSD7Q6UXD7 560 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 SPOCD1Q6ZMY3 1216 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 RSRC2Q7L4I2 434 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 BEND5Q7L4P6 421 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 ZNF572Q7Z3I7 529 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 FAM131BQ86XD5 332 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 SLC13A5Q86YT5 568 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 TCEAL8Q8IYN2 117 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 MRPL43Q8N983 215 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 SPATA4Q8NEY3 305 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 DQX1Q8TE96 717 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 MAIP1Q8WWC4 291 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 RAPGEF5Q92565 580 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 UBXN4Q92575 508 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 RNF34Q969K3 372 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 NT5C3BQ969T7 300 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 SLITRK1Q96PX8 696 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 GDF15Q99988 308 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 SNRNP25Q9BV90 132 aaKnown RBP10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 HEMGNQ9BXL5 484 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 AP1M1Q9BXS5 423 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 ADAM33Q9BZ11 813 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 OSBPL8Q9BZF1 889 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
HNRNPC-220ENST00000555585 CERS4Q9HA82 394 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms