RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ZNF771Q7L3S4 317 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-213ENST00000555386 IRF2BP2Q7Z5L9 587 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
PSEN1-213ENST00000555386 MRPS31Q92665 395 aaKnown RBP10.35□□□□□ -0.75
PSEN1-213ENST00000555386 CAPZA3Q96KX2 299 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 SLITRK1Q96PX8 696 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 CYP2S1Q96SQ9 504 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 KXD1Q9BQD3 176 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 MIS12Q9H081 205 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 CSNK1G1Q9HCP0 422 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 MED4Q9NPJ6 270 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.35□□□□□ -0.75
PSEN1-213ENST00000555386 TRPM5Q9NZQ8 1165 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 CDH7Q9ULB5 785 aa10.35□□□□□ -0.75
PSEN1-213ENST00000555386 A0A087X0T9 212 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 C2orf78A6NCI8 922 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 PDE2AO00408 941 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-213ENST00000555386 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
PSEN1-213ENST00000555386 F11P03951 625 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 MMEP08473 750 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 CCDC172P0C7W6 258 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 FAM228BP0C875 321 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 SETSIPP0DME0 302 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 LAMP2P13473 410 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 FERP16591 822 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 TNFRSF8P28908 595 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 VIPR2P41587 438 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 PGFP49763 221 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 EPHA5P54756 1037 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 STILQ15468 1287 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 CCDC181Q5TID7 509 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 TMEM150AQ86TG1 271 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 GJD3Q8N144 294 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 SIX6OS1Q8N1H7 587 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 ARL14EPQ8N8R7 260 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-213ENST00000555386 LEMD2Q8NC56 503 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 C1orf131Q8NDD1 294 aaKnown RBP10.34□□□□□ -0.75
PSEN1-213ENST00000555386 SPATA4Q8NEY3 305 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 ZSCAN18Q8TBC5 510 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-213ENST00000555386 TRMT2BQ96GJ1 504 aaKnown RBP10.34□□□□□ -0.75
PSEN1-213ENST00000555386 TLR10Q9BXR5 811 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 ULBP1Q9BZM6 244 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 NACA2Q9H009 215 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 CD320Q9NPF0 282 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 PSD3Q9NYI0 1048 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 EHD2Q9NZN4 543 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 NUDT5Q9UKK9 219 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 PRDM4Q9UKN5 801 aa10.34□□□□□ -0.75
PSEN1-213ENST00000555386 A0A0A6YYK5 440 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-213ENST00000555386 A0A1W2PQH9 124 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 LOC730098B7Z3J9 87 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 ZNF185O15231 689 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 PAPLNO95428 1278 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 FGF19O95750 216 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 CKMP06732 381 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 HSP90B2PQ58FF3 399 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 FAM78AQ5JUQ0 283 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 MEI1Q5TIA1 1274 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 PARM1Q6UWI2 310 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 CCNI2Q6ZMN8 369 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-213ENST00000555386 PHLDB2Q86SQ0 1253 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 FAM71BQ8TC56 605 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 EPS8L1Q8TE68 723 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 CLEC4CQ8WTT0 213 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 SLC35F5Q8WV83 523 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 EXOC4Q96A65 974 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 MYRFLQ96LU7 910 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 SLC22A12Q96S37 553 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSEN1-213ENST00000555386 RPP25Q9BUL9 199 aaKnown RBP10.33□□□□□ -0.76
PSEN1-213ENST00000555386 SLC46A2Q9BY10 475 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 FBXO44Q9H4M3 255 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 SYNCQ9H7C4 482 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 CCSER2Q9H7U1 834 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 AVENQ9NQS1 362 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-213ENST00000555386 TJP2Q9UDY2 1190 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 PRKAG3Q9UGI9 489 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 CYTH4Q9UIA0 394 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 SALL4Q9UJQ4 1053 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 NAGPAQ9UK23 515 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 NENFQ9UMX5 172 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 CEP83Q9Y592 693 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 BDP1A6H8Y1 2624 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 MYOFQ9NZM1 2061 aa10.33□□□□□ -0.76
PSEN1-213ENST00000555386 HELZP42694 1942 aaKnown RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 NUP210Q8TEM1 1887 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 ZNF840PA6NDX5 716 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 DPYSL4O14531 572 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 SCAMP3O14828 347 aaKnown RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 MDM4O15151 490 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 PRAMEF12O95522 483 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 TBX18O95935 607 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 AVPR1AP37288 418 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 GPD2P43304 727 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 NAP1L1P55209 391 aaKnown RBP10.32□□□□□ -0.76
PSEN1-213ENST00000555386 GRM2Q14416 872 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 C2CD6Q53TS8 623 aa10.32□□□□□ -0.76
PSEN1-213ENST00000555386 NAA35Q5VZE5 725 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms