RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LTFP02788 710 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 CYP17A1P05093 508 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 HMBSP08397 361 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 PNMA6AP0CW24 399 aaPredicted RBP12.67□□□□□ -0.38
SRP54-206ENST00000555317 ADH5P11766 374 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 DRD1P21728 446 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 GPD2P43304 727 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 DAOAP59103 153 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
SRP54-206ENST00000555317 NCAPHQ15003 741 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 DHCR24Q15392 516 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 ANO4Q32M45 955 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 SLC47A2Q86VL8 602 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 C1orf210Q8IVY1 113 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 BBS7Q8IWZ6 715 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 DHX40Q8IX18 779 aaKnown RBP12.67□□□□□ -0.38
SRP54-206ENST00000555317 FAM71AQ8IYT1 594 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 CCDC26Q8TAB7 109 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
SRP54-206ENST00000555317 STK32AQ8WU08 396 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
SRP54-206ENST00000555317 EDEM1Q92611 657 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 CD101Q93033 1021 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 FAM149B1Q96BN6 582 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 CHRDQ9H2X0 955 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 DLGAP2Q9P1A6 1054 aa12.67□□□□□ -0.38
SRP54-206ENST00000555317 ATG2BQ96BY7 2078 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.66□□□□□ -0.38
SRP54-206ENST00000555317 TRDMT1O14717 391 aaKnown RBP12.66□□□□□ -0.38
SRP54-206ENST00000555317 CAPN9O14815 690 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 SERPINC1P01008 464 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 ATP1A3P13637 1013 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 CLCN1P35523 988 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 HARS2P49590 506 aaKnown RBP12.66□□□□□ -0.38
SRP54-206ENST00000555317 KLK7P49862 253 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 GAD2Q05329 585 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 TCF15Q12870 199 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 PDCLQ13371 301 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
SRP54-206ENST00000555317 HTR3DQ70Z44 454 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 ADGRG2Q8IZP9 1017 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 PLD4Q96BZ4 506 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 NLRC4Q9NPP4 1024 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 PCDHGC3Q9UN70 934 aa12.66□□□□□ -0.38
SRP54-206ENST00000555317 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 SHISA7A6NL88 538 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 E5RJQ4 531 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 STC2O76061 302 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 GFPT2O94808 682 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CHRNB1P11230 501 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 NCAM1P13591 858 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CYP11B1P15538 503 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CORO1AP31146 461 aaKnown RBP12.65□□□□□ -0.38
SRP54-206ENST00000555317 STAT1P42224 750 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 GALK1P51570 392 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CCR3P51677 355 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 MTAPQ13126 283 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CCINQ13939 588 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 FBXO43Q4G163 708 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 LY6G5CQ5SRR4 150 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 TAF3Q5VWG9 929 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 ZC3H14Q6PJT7 736 aaKnown RBP12.65□□□□□ -0.38
SRP54-206ENST00000555317 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 SCUBE3Q8IX30 993 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 TMEM35BQ8NCS4 154 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 C1orf131Q8NDD1 294 aaKnown RBP12.65□□□□□ -0.38
SRP54-206ENST00000555317 CLEC4CQ8WTT0 213 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 CHFRQ96EP1 664 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 PPP1R13BQ96KQ4 1090 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 NAA15Q9BXJ9 866 aaKnown RBP12.65□□□□□ -0.38
SRP54-206ENST00000555317 SLC4A5Q9BY07 1137 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 GANQ9H2C0 597 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 LHX5Q9H2C1 402 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 SPHK2Q9NRA0 654 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 RBM12Q9NTZ6 932 aaKnown RBP12.65□□□□□ -0.38
SRP54-206ENST00000555317 SIK3Q9Y2K2 1263 aa12.65□□□□□ -0.38
SRP54-206ENST00000555317 HBS1LQ9Y450 684 aaKnown RBP12.65□□□□□ -0.38
SRP54-206ENST00000555317 ZFHX2Q9C0A1 2572 aaPredicted RBP12.65□□□□□ -0.39
SRP54-206ENST00000555317 VPS13AQ96RL7 3174 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 NEDD8-MDP1E9PL57 170 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 ATG13O75143 517 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 CYBBP04839 570 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 APODP05090 189 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 SOX5P35711 763 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 CHKAP35790 457 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 PLA2G5P39877 138 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 NHLH1Q02575 133 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
SRP54-206ENST00000555317 FSTL4Q6MZW2 842 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 DPY19L2P1Q6NXN4 242 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 RHBDF2Q6PJF5 856 aa12.64□□□□□ -0.39
SRP54-206ENST00000555317 TPGS1Q6ZTW0 290 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms