RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 UBXN10Q96LJ8 280 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 PRR25Q96S07 402 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 PAAF1Q9BRP4 392 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 TAF1DQ9H5J8 278 aaPredicted RBP6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 ELAC1Q9H777 363 aaKnown RBP6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 SNX15Q9NRS6 342 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 SERTAD4Q9NUC0 356 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 SYBUQ9NX95 663 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 RRN3Q9NYV6 651 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 NDUFAF4Q9P032 175 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 LRIT1Q9P2V4 623 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 CNTN6Q9UQ52 1028 aa6.2□□□□□ -1.42
CKS1BP1-201ENST00000555221 GXYLT2A0PJZ3 443 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A18PA6NE21 464 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A16PA6NEW6 464 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A9PA6NNJ1 464 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A5PA8MXJ8 464 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 H0Y3Z8 333 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 EIF3FO00303 357 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 SPRY2O43597 315 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 PPP6R2O75170 966 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 RPP40O75818 363 aaKnown RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF202O95125 648 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 CER1O95813 267 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 TTLL1O95922 423 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A15PP0C7V4 464 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A14PP0C7W9 464 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 NDUFB7P17568 137 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 MMP8P22894 467 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 GRIA3P42263 894 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 AARSP49588 968 aaKnown RBP eCLIP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 RPS6KA2Q15349 733 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 AASDHQ4L235 1098 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAM90A2PQ658T7 463 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 CCDC70Q6NSX1 233 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 CCDC144NLQ6NUI1 221 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 MSANTD2Q6P1R3 559 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 ANKRD16Q6P6B7 361 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 Q6YL49 198 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 DPY19L3Q6ZPD9 716 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 PTCHD4Q6ZW05 846 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 KRT27Q7Z3Y8 459 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 ABHD11Q8NFV4 315 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 ACTRT2Q8TDY3 377 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 PNISRQ8TF01 805 aaKnown RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 USP13Q92995 863 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 C3orf49Q96BT1 292 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 CTHRC1Q96CG8 243 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 PYM1Q9BRP8 204 aaKnown RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 VPS16Q9H269 839 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 FBXO28Q9NVF7 368 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 AMFRQ9UKV5 643 aa6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 UBE2J1Q9Y385 318 aaPredicted RBP6.19□□□□□ -1.42
CKS1BP1-201ENST00000555221 CES2O00748 559 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 NCAM2O15394 837 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 CTIFO43310 598 aaKnown RBP6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 SH3BP5O60239 455 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 ADH4P08319 380 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 NPSP0C0P6 89 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF37AP17032 561 aaPredicted RBP6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 PCSK6P29122 969 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 CTGFP29279 349 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 CYP2C18P33260 490 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 MCM7P33993 719 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 MCM2P49736 904 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 BFSP2Q13515 415 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF569Q5MCW4 686 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 TTC22Q5TAA0 569 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 MMS22LQ6ZRQ5 1243 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 C2CD5Q86YS7 1000 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 PNPLA1Q8N8W4 532 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 HMGB4Q8WW32 186 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 LIN7CQ9NUP9 197 aaKnown RBP6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 MGAT4CQ9UBM8 478 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 ANAPC4Q9UJX5 808 aa6.18□□□□□ -1.42
CKS1BP1-201ENST00000555221 ARID1BQ8NFD5 2236 aaPredicted RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 AP4M1O00189 453 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 QSOX1O00391 747 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 MYCLP12524 364 aaPredicted RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 SERPINA4P29622 427 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 MCM5P33992 734 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 MPLP40238 635 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 SEC24CP53992 1094 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 PRKAA2P54646 552 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 ACTR2P61160 394 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 TXNL4AP83876 142 aaKnown RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 SF3A3Q12874 501 aaKnown RBP eCLIP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 CUL4BQ13620 913 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 CBFBQ13951 182 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 TBRG1Q3YBR2 411 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 GRHL2Q6ISB3 625 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 RRAGAQ7L523 313 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 PEG10Q86TG7 708 aaKnown RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 SLC22A17Q8WUG5 538 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 AFG1LQ8WV93 481 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 FAR2Q96K12 515 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF747Q9BV97 191 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 CINPQ9BW66 212 aaPredicted RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 TWSG1Q9GZX9 223 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms