RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 RGL1Q9NZL6 768 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 VPS54Q9P1Q0 977 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 CEP72Q9P209 647 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 FASNP49327 2511 aaKnown RBP5.28□□□□□ -1.56
ATXN3-229ENST00000554672 COL4A3Q01955 1670 aa5.28□□□□□ -1.56
ATXN3-229ENST00000554672 DOCK8Q8NF50 2099 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TEX51A0A1B0GUA7 166 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 H0Y626 953 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 I3L4J1 428 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 ACKR2O00590 384 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TBX3O15119 743 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 RECQL4O94761 1208 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TRIM16O95361 564 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 LYPLA2O95372 231 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 IFNAR1P17181 557 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 GJA1P17302 382 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 BRCC3P46736 316 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 RNF4P78317 190 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TWF1Q12792 350 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 PLD1Q13393 1074 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 CTTNQ14247 550 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 KARSQ15046 597 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 NTRK3Q16288 839 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 ITPRIPL2Q3MIP1 535 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 CTXN3Q4LDR2 81 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TMEM196Q5HYL7 178 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 ARID3BQ8IVW6 561 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 ZBTB8OSQ8IWT0 167 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 FAM177A1Q8N128 213 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 ZNF655Q8N720 491 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TTC8Q8TAM2 541 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 EVPLQ92817 2033 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 RSPRY1Q96DX4 576 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 DYDC2Q96IM9 177 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 MAP6Q96JE9 813 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 LRRC3BQ96PB8 259 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 PPP1R10Q96QC0 940 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 NAP1L4Q99733 375 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 HSD17B14Q9BPX1 270 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 ADPGKQ9BRR6 497 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 PRDM14Q9GZV8 571 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 C2orf40Q9H1Z8 148 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 CXCL16Q9H2A7 254 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 THG1LQ9NWX6 298 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 GTSE1Q9NYZ3 720 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 FBXL5Q9UKA1 691 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 TCFL5Q9UL49 500 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 CNOT1A5YKK6 2376 aaKnown RBP5.27□□□□□ -1.57
ATXN3-229ENST00000554672 F5P12259 2224 aa5.27□□□□□ -1.57
ATXN3-229ENST00000554672 C2orf16Q68DN1 1984 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 SMIM28A0A1B0GU29 152 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 LNP1A1A4G5 178 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 LRRIQ4A6NIV6 560 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 EIF4E1BA6NMX2 242 aaKnown RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 CDX4O14627 284 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 TRDMT1O14717 391 aaKnown RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 DCLK1O15075 740 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 MEFVO15553 781 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 SLC37A4O43826 429 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 NRDCO43847 1150 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 NUAK1O60285 661 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 SEMA7AO75326 666 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 PRAMEF1O95521 474 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 FGF19O95750 216 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 SYPP08247 313 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 GCFC2P16383 781 aaKnown RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 DRD1P21728 446 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 MARCKSP29966 332 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 RPL9P32969 192 aaKnown RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 ALDH1A3P47895 512 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 EPHB3P54753 998 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 CYP4A11Q02928 519 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 KIR3DS1Q14943 382 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 MAPK6Q16659 721 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 INF2Q27J81 1249 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 ADCK5Q3MIX3 580 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 DCAF4L1Q3SXM0 396 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 FBXO43Q4G163 708 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 SEZ6Q53EL9 994 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 USP39Q53GS9 565 aaKnown RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 ARHGAP15Q53QZ3 475 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 XKR4Q5GH76 650 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 NCAPH2Q6IBW4 605 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 ZNF280DQ6N043 979 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 C19orf48Q6RUI8 117 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 GK5Q6ZS86 529 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 Q6ZUG5 572 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 NLRC3Q7RTR2 1065 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms