RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 KNL1Q8NG31 2342 aa8.62□□□□□ -1.03
ACTN1-212ENST00000554158 ASPMQ8IZT6 3477 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 KNTC1P50748 2209 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 PTPRJQ12913 1337 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 FAM221BA6H8Z2 402 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 TAF4O00268 1085 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 GFRA2O00451 464 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 NPC1O15118 1278 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 EIF3DO15371 548 aaKnown RBP eCLIP8.61□□□□□ -1.03
ACTN1-212ENST00000554158 CACNG3O60359 315 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 CYBBP04839 570 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 NCAM1P13591 858 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 CD59P13987 128 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 OXTRP30559 389 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 MATKP42679 507 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 SNRPFP62306 86 aaKnown RBP8.61□□□□□ -1.03
ACTN1-212ENST00000554158 FAM193AP78312 1265 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 MESP2Q0VG99 397 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 GRIK2Q13002 908 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 PSMD6Q15008 389 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 COL28A1Q2UY09 1125 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 TMEM259Q4ZIN3 620 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 ERICH6BQ5W0A0 696 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 SCARA5Q6ZMJ2 495 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 USP49Q70CQ1 688 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 LIMS2Q7Z4I7 341 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 FAM35AQ86V20 835 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 ETFBKMTQ8IXQ9 262 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 GALNT15Q8N3T1 639 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 PNPLA1Q8N8W4 532 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 XXYLT1Q8NBI6 393 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 TTC13Q8NBP0 860 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 SCAMP5Q8TAC9 235 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 SNX19Q92543 992 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 BHMTQ93088 406 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 ZNF419Q96HQ0 510 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-212ENST00000554158 CAMK1GQ96NX5 476 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 CLIC6Q96NY7 704 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 KCNK16Q96T55 309 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 TNMDQ9H2S6 317 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 DPEP3Q9H4B8 488 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 KRT82Q9NSB4 513 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 CACNA2D2Q9NY47 1150 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.61□□□□□ -1.03
ACTN1-212ENST00000554158 FBXO2Q9UK22 296 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-212ENST00000554158 GPSM3Q9Y4H4 160 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 RAD54BQ9Y620 910 aa8.61□□□□□ -1.03
ACTN1-212ENST00000554158 DSPP15924 2871 aaKnown RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 UBE4BO95155 1302 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 A0A1W2PQF6 199 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 FRMD3A2A2Y4 597 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CLIC2O15247 247 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 BCAT2O15382 392 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 EXOC3O60645 756 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 GABBR2O75899 941 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 RALAP11233 206 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 MAOBP27338 520 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 ZNF132P52740 706 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 AP3M2P53677 418 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CACNA2D1P54289 1103 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CDH8P55286 799 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 MYL6P60660 151 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CYP24A1Q07973 514 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 STK38Q15208 465 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 TEAD4Q15561 434 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 INAVAQ3KP66 663 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CCDC157Q569K6 752 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 FAM26FQ5R3K3 315 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 C10orf120Q5SQS8 335 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 SNX30Q5VWJ9 437 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CCNI2Q6ZMN8 369 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 TOGARAM2Q6ZUX3 1019 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 HTR3DQ70Z44 454 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 SLC41A1Q8IVJ1 513 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 NELFCDQ8IXH7 590 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 PHTF2Q8N3S3 785 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 ZCCHC9Q8N567 271 aaKnown RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 RHBDD1Q8TEB9 315 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 HNRNPLLQ8WVV9 542 aaKnown RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 PRCCQ92733 491 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 ZDHHC16Q969W1 377 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 TOE1Q96GM8 510 aaKnown RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 MRGPRX1Q96LB2 322 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 DUSP9Q99956 384 aaKnown RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 GPR174Q9BXC1 333 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CUEDC2Q9H467 287 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 GAREM1Q9H706 876 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 CGNQ9P2M7 1197 aaKnown RBP8.6□□□□□ -1.03
ACTN1-212ENST00000554158 ZNF510Q9Y2H8 683 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 NUMA1Q14980 2115 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 ZZEF1O43149 2961 aa8.6□□□□□ -1.03
ACTN1-212ENST00000554158 APC2O95996 2303 aa8.59□□□□□ -1.03
ACTN1-212ENST00000554158 MYLKQ15746 1914 aa8.59□□□□□ -1.03
ACTN1-212ENST00000554158 FLRT2O43155 660 aa8.59□□□□□ -1.03
ACTN1-212ENST00000554158 STX6O43752 255 aa8.59□□□□□ -1.03
ACTN1-212ENST00000554158 KIF20AO95235 890 aa8.59□□□□□ -1.03
ACTN1-212ENST00000554158 STAU1O95793 577 aaKnown RBP8.59□□□□□ -1.03
ACTN1-212ENST00000554158 CST3P01034 146 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms