RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 SOX18P35713 384 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PEX5P50542 639 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 POLGP54098 1239 aaPredicted RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 RAD23BP54727 409 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 ATP2C1P98194 919 aaPredicted RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 CYP4A11Q02928 519 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 GRB10Q13322 594 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 RCN2Q14257 317 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 ODF1Q14990 250 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 STK38Q15208 465 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 SLC35G1Q2M3R5 365 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CPZQ66K79 652 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 NEPROQ6NW34 567 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 MFSD6Q6ZSS7 791 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 RFX8Q6ZV50 586 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 GALNT7Q86SF2 657 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 ZC3H18Q86VM9 953 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 TXNRD3Q86VQ6 643 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 COL23A1Q86Y22 540 aaPredicted RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 WFDC8Q8IUA0 241 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CLVS1Q8IUQ0 354 aaPredicted RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.19□□□□□ -1.74
RDH11-204ENST00000553578 MYCBPAPQ8TBZ2 947 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 IRGQQ8WZA9 623 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 ANKRD36BP1Q96IX9 119 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 RIPOR3Q96MK2 946 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 NOX5Q96PH1 765 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 TSG101Q99816 390 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 SARGQ9BW04 601 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 GBA3Q9H227 469 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 BHMT2Q9H2M3 363 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CLK4Q9HAZ1 481 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 ZNF277Q9NRM2 450 aaPredicted RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 SRP68Q9UHB9 627 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 GGA2Q9UJY4 613 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 GMEB2Q9UKD1 530 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 USP18Q9UMW8 372 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 FAM32AQ9Y421 112 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 A0A1W2PQH9 124 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PRAMEF25A6NGN4 478 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 ZSCAN5BA6NJL1 495 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 RTCAO00442 366 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 NDC80O14777 642 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 BIRC5O15392 142 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 NCK2O43639 380 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 NMT2O60551 498 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 APBA3O96018 575 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 LMNAP02545 664 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 ITGAVP06756 1048 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 RAC2P15153 192 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 KLRK1P26718 216 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 EVI2BP34910 448 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 SERPINB6P35237 376 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CPA2P48052 419 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CACNA2D1P54289 1103 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 UBXN2AP68543 259 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 SULT2A1Q06520 285 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 IFI16Q16666 785 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 OVOS1Q6IE37 1185 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 MIGA2Q7L4E1 593 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 THAP5Q7Z6K1 395 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CCNJLQ8IV13 435 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 NOSTRINQ8IVI9 506 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CEP97Q8IW35 865 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 DHX40Q8IX18 779 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 ANKS4BQ8N8V4 417 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PDZD8Q8NEN9 1154 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 OR13H1Q8NG92 308 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 RSAD2Q8WXG1 361 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 KCTD13Q8WZ19 329 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PRCCQ92733 491 aaPredicted RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 CYFIP2Q96F07 1278 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CLUHP3Q96NS8 147 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 NT5C1BQ96P26 610 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CGREF1Q99674 301 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 ZKSCAN3Q9BRR0 538 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 CRNKL1Q9BZJ0 848 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 CCDC113Q9H0I3 377 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PSTPIP2Q9H939 334 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 WDR6Q9NNW5 1121 aaKnown RBP4.19□□□□□ -1.74
RDH11-204ENST00000553578 LZTFL1Q9NQ48 299 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PDP2Q9P2J9 529 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 IMPACTQ9P2X3 320 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 PCDHA7Q9UN72 937 aa4.19□□□□□ -1.74
RDH11-204ENST00000553578 C9IYK1 514 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 PODXLO00592 558 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GIPC1O14908 333 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ZBTB43O43298 467 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ENTPD3O75355 529 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 MTHFD1P11586 935 aaKnown RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 ZNF18P17022 549 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 RFC4P35249 363 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HNF1BP35680 557 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 ARL1P40616 181 aaPredicted RBP4.18□□□□□ -1.74
RDH11-204ENST00000553578 GRIA4P48058 902 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 DGKGP49619 791 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 HPCAP84074 193 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GALK2Q01415 458 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GBE1Q04446 702 aa4.18□□□□□ -1.74
RDH11-204ENST00000553578 GOLGA8DPQ0D2H9 430 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms