RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 ATRIPQ8WXE1 791 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 ACP6Q9NPH0 428 aa24.76■■□□□ 1.55
TDP1-205ENST00000553527 PRMT8Q9NR22 394 aaPredicted RBP24.76■■□□□ 1.55
TDP1-205ENST00000553527 LSM7Q9UK45 103 aaKnown RBP24.76■■□□□ 1.55
TDP1-205ENST00000553527 ADH1CP00326 375 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 ADH5P11766 374 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 OPRD1P41143 372 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 GAB4Q2WGN9 574 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 PM20D1Q6GTS8 502 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 SLC35F5Q8WV83 523 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 CDK5RAP1Q96SZ6 601 aaKnown RBP24.75■■□□□ 1.55
TDP1-205ENST00000553527 CNTN6Q9UQ52 1028 aa24.75■■□□□ 1.55
TDP1-205ENST00000553527 GTPBP10A4D1E9 387 aaKnown RBP24.74■■□□□ 1.55
TDP1-205ENST00000553527 THAP12O43422 761 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 HOXC13P31276 330 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 SEC13P55735 322 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 KLHDC10Q6PID8 442 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 MAMSTRQ6ZN01 415 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 HTR3DQ70Z44 454 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 TMEM25Q86YD3 366 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 KCTD13Q8WZ19 329 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 EDEM1Q92611 657 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 OTUB2Q96DC9 234 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 FAM81BQ96LP2 452 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 POLR3BQ9NW08 1133 aaPredicted RBP24.74■■□□□ 1.55
TDP1-205ENST00000553527 ZSCAN32Q9NX65 697 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 ZFHX2Q9C0A1 2572 aaPredicted RBP24.74■■□□□ 1.55
TDP1-205ENST00000553527 DMDP11532 3685 aa24.74■■□□□ 1.55
TDP1-205ENST00000553527 YJEFN3A6XGL0 299 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 E7ENQ6 273 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 GNA15P30679 374 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 GAD2Q05329 585 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 FKBP15Q5T1M5 1219 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 HEATR6Q6AI08 1181 aaKnown RBP24.73■■□□□ 1.55
TDP1-205ENST00000553527 DENND1BQ6P3S1 775 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 TPGS1Q6ZTW0 290 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 C12orf40Q86WS4 652 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 ZNF606Q8WXB4 792 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 EZH1Q92800 747 aaPredicted RBP24.73■■□□□ 1.55
TDP1-205ENST00000553527 MIS12Q9H081 205 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 SPHK2Q9NRA0 654 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 ST7Q9NRC1 585 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 MARCH2Q9P0N8 246 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 DNAJC12Q9UKB3 198 aa24.73■■□□□ 1.55
TDP1-205ENST00000553527 AJAP1Q9UKB5 411 aaPredicted RBP24.73■■□□□ 1.55
TDP1-205ENST00000553527 SLC12A8A0AV02 714 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 PRR23AA6NEV1 266 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 LGALS16A8MUM7 142 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 MED7O43513 233 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 GREM1O60565 184 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 GABBR2O75899 941 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 STC2O76061 302 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 COG7P83436 770 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 BSPRYQ5W0U4 402 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 BHLHA9Q7RTU4 235 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 ZNF276Q8N554 614 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 RPLP0P6Q8NHW5 317 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 CLEC4CQ8WTT0 213 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 RNF139Q8WU17 664 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 PNKPQ96T60 521 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 SIX2Q9NPC8 291 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 CNGB3Q9NQW8 809 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 STRIP2Q9ULQ0 834 aa24.72■■□□□ 1.55
TDP1-205ENST00000553527 ANTXRLA6NF34 631 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 ATG13O75143 517 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 SERPINC1P01008 464 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 NRLP54845 237 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 DAOAP59103 153 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 KDSRQ06136 332 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 DMWDQ09019 674 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 FBXO43Q4G163 708 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 C2orf27AQ580R0 203 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 APTXQ7Z2E3 356 aaKnown RBP24.71■■□□□ 1.55
TDP1-205ENST00000553527 SFTPA1Q8IWL2 248 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 BHMTQ93088 406 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 SFMBT1Q9UHJ3 866 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 PCDHGA2Q9Y5H1 932 aa24.71■■□□□ 1.55
TDP1-205ENST00000553527 LRRC10BA6NIK2 292 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 CHURC1-FNTBB4DL54 471 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 PNMA6AP0CW24 399 aaPredicted RBP24.7■■□□□ 1.54
TDP1-205ENST00000553527 TDGF1P13385 188 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 FNTBP49356 437 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 MESP2Q0VG99 397 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 KCNMA1Q12791 1236 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 FILIP1LQ4L180 1135 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 SCUBE3Q8IX30 993 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 HSFY1Q96LI6 401 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 SLC8A2Q9UPR5 921 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 KIAA1549LQ6ZVL6 1849 aa24.7■■□□□ 1.54
TDP1-205ENST00000553527 MYO18AQ92614 2054 aaKnown RBP24.7■■□□□ 1.54
TDP1-205ENST00000553527 NEDD8-MDP1E9PL57 170 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 K7EQS6 105 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 K7ESF4 209 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 LMNAP02545 664 aaKnown RBP24.69■■□□□ 1.54
TDP1-205ENST00000553527 KLKB1P03952 638 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 APODP05090 189 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 CORO1AP31146 461 aaKnown RBP24.69■■□□□ 1.54
TDP1-205ENST00000553527 GPD2P43304 727 aa24.69■■□□□ 1.54
TDP1-205ENST00000553527 PXNP49023 591 aaPredicted RBP24.69■■□□□ 1.54
TDP1-205ENST00000553527 DENND1CQ8IV53 801 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms