RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MGAT5Q09328 741 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 PTK7Q13308 1070 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 TPSAB1Q15661 275 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 FAM47EQ6ZV65 393 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 CYS1Q717R9 158 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 PQLC3Q8N755 202 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 MTBPQ96DY7 904 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 APOPT1Q96IL0 206 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 HSFY1Q96LI6 401 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 TMEM237Q96Q45 408 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 C11orf84Q9BUA3 381 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-205ENST00000553474 TUBB6Q9BUF5 446 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 SNRNP25Q9BV90 132 aaKnown RBP13.41□□□□□ -0.26
SHMT2-205ENST00000553474 NOD2Q9HC29 1040 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 NGRNQ9NPE2 291 aaKnown RBP13.41□□□□□ -0.26
SHMT2-205ENST00000553474 RAB6BQ9NRW1 208 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 MKS1Q9NXB0 559 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 SLC5A4Q9NY91 659 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 CHMP2BQ9UQN3 213 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 A6NJR5 290 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 KBTBD13C9JR72 458 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 KLF11O14901 512 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 KCNN4O15554 427 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 BANF1O75531 89 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 WFS1O76024 890 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 NPTXRO95502 500 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 DHRS4L1P0CG22 281 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 PRKCHP24723 683 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 FLT3LGP49771 235 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 SARNPP82979 210 aaKnown RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 CDK16Q00536 496 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 GAD2Q05329 585 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 CDO1Q16878 200 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 GJC2Q5T442 439 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 TTC39BQ5VTQ0 682 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 STRADAQ7RTN6 431 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 CATSPER4Q7RTX7 472 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 ACOT1Q86TX2 421 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 LRRC6Q86X45 466 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 TRIM42Q8IWZ5 723 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 AGGF1Q8N302 714 aaeCLIP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 C12orf29Q8N999 325 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 NPLOC4Q8TAT6 608 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 TCP10LQ8TDR4 215 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 C10orf82Q8WW14 230 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 APBA2Q99767 749 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 LRMDAQ9H2I8 198 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 NRDE2Q9H7Z3 1164 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 XAB2Q9HCS7 855 aaKnown RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 SAR1AQ9NR31 198 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 ETNK2Q9NVF9 386 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 GRID1Q9ULK0 1009 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 RPL26L1Q9UNX3 145 aaKnown RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 TRIM17Q9Y577 477 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 MBLAC1A4D2B0 266 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 HACD1B0YJ81 288 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 TRAFD1O14545 582 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 LPXNO60711 386 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 MAGEA3P43357 314 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 LBX1P52954 281 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 HDAC4P56524 1084 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 ATP11AP98196 1134 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 CCL14Q16627 93 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 NPNTQ6UXI9 565 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF276Q8N554 614 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 PCDH19Q8TAB3 1148 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 PIWIL1Q96J94 861 aaKnown RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 MAML3Q96JK9 1138 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 FERMT1Q9BQL6 677 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
SHMT2-205ENST00000553474 MANSC1Q9H8J5 431 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 C10orf88Q9H8K7 445 aa13.4□□□□□ -0.26
SHMT2-205ENST00000553474 A8MXQ7 604 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 SMPD1P17405 629 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 CCND1P24385 295 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 CNTFP26441 200 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 HOXD10P28358 340 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 NEK3P51956 506 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHMT2-205ENST00000553474 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
SHMT2-205ENST00000553474 EFTUD2Q15029 972 aaKnown RBP eCLIP13.39□□□□□ -0.274e-8■■■■■ 44
SHMT2-205ENST00000553474 ARHGEF6Q15052 776 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 KBTBD12Q3ZCT8 623 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 XKR4Q5GH76 650 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 EFHC1Q5JVL4 640 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 C9orf57Q5W0N0 161 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
SHMT2-205ENST00000553474 SH2D5Q6ZV89 423 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms