RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 EPS8L1Q8TE68 723 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ERLEC1Q96DZ1 483 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 KCNK16Q96T55 309 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 BBS2Q9BXC9 721 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 GZF1Q9H116 711 aaPredicted RBP10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ALG2Q9H553 416 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.732e-13■■■■■ 158.6
ACTN1-208ENST00000553370 SPHK2Q9NRA0 654 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 DSPP15924 2871 aaKnown RBP10.48□□□□□ -0.73
ACTN1-208ENST00000553370 ATRXP46100 2492 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 PKD1L2Q7Z442 2459 aa10.48□□□□□ -0.73
ACTN1-208ENST00000553370 CKAP5Q14008 2032 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 PVALEFA0A1B0GWK0 134 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 TNFRSF10BO14763 440 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 NDUFS2O75306 463 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 RDXP35241 583 aaKnown RBP10.47□□□□□ -0.73
ACTN1-208ENST00000553370 P2RY2P41231 377 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 IRX4P78413 519 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 GFPT1Q06210 699 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-208ENST00000553370 CUL4BQ13620 913 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 GAB4Q2WGN9 574 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 KIAA1211LQ6NV74 962 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 CNNM4Q6P4Q7 775 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 UNQ6494/PRO21346Q6UXR6 183 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 SLC36A4Q6YBV0 504 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 TPGS1Q6ZTW0 290 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 TADA2BQ86TJ2 420 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 GRAMD1CQ8IYS0 662 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 TERB1Q8NA31 727 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 PRR7Q8TB68 274 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 BHMTQ93088 406 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 MMRN2Q9H8L6 949 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 TMEM30AQ9NV96 361 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 COMMD8Q9NX08 183 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 CFAP45Q9UL16 551 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 NME7Q9Y5B8 376 aa10.47□□□□□ -0.73
ACTN1-208ENST00000553370 NUMA1Q14980 2115 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 TM4SF5O14894 197 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 HOXC11O43248 304 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-208ENST00000553370 CALUO43852 315 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-208ENST00000553370 F13A1P00488 732 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 NR3C1P04150 777 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 RPN1P04843 607 aaKnown RBP10.46□□□□□ -0.73
ACTN1-208ENST00000553370 ZSCAN22P10073 491 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-208ENST00000553370 KRT13P13646 458 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 CEACAM1P13688 526 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 ENGP17813 658 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 NTSR1P30989 418 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 PTGER3P43115 390 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 NDST1P52848 882 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 STARD3Q14849 445 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 BMT2Q1RMZ1 405 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 SGSM1Q2NKQ1 1148 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 KMT5BQ4FZB7 885 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 C10orf120Q5SQS8 335 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 KIAA1324Q6UXG2 1013 aaKnown RBP10.46□□□□□ -0.73
ACTN1-208ENST00000553370 RGL4Q8IZJ4 473 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 DEFB119Q8N690 84 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 CEP76Q8TAP6 659 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 ZNF516Q92618 1163 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 TAF4BQ92750 862 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 ELMO3Q96BJ8 720 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 XYLT2Q9H1B5 865 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 CALCOCO1Q9P1Z2 691 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 WDR35Q9P2L0 1181 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 EVLQ9UI08 416 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-208ENST00000553370 NAGPAQ9UK23 515 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 CYP8B1Q9UNU6 501 aa10.46□□□□□ -0.73
ACTN1-208ENST00000553370 ZZEF1O43149 2961 aa10.46□□□□□ -0.74
ACTN1-208ENST00000553370 TMEM131Q92545 1883 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ANTXRLA6NF34 631 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 MEI4A8MW99 385 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 CYP26A1O43174 497 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 OPHN1O60890 802 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ADAM23O75077 832 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ZNF217O75362 1048 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 PROS1P07225 676 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 TYRP14679 529 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 HNRNPLP14866 589 aaKnown RBP eCLIP10.45□□□□□ -0.746e-6■■□□□ 12.3
ACTN1-208ENST00000553370 CD58P19256 250 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 SPINK2P20155 84 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 CSRP1P21291 193 aaKnown RBP10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ACO1P21399 889 aaKnown RBP10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ITPKAP23677 461 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 HOXD12P35452 270 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ATP5C1P36542 298 aaKnown RBP10.45□□□□□ -0.74
ACTN1-208ENST00000553370 KIR2DL1P43626 348 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-208ENST00000553370 DGKGP49619 791 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 ARID5AQ03989 594 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 MESP2Q0VG99 397 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 NR6A1Q15406 480 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 DUOXA1Q1HG43 343 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 SPDYCQ5MJ68 293 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 RESP18Q5W5W9 173 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 EGFLAMQ63HQ2 1017 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 RSRC2Q7L4I2 434 aaKnown RBP10.45□□□□□ -0.74
ACTN1-208ENST00000553370 LAPTM4BQ86VI4 370 aa10.45□□□□□ -0.74
ACTN1-208ENST00000553370 UNC93AQ86WB7 457 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms