RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 KIAA1549LQ6ZVL6 1849 aa20.23■□□□□ 0.83
PTCH1-227ENST00000553256 FAM186AA6NE01 2351 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 M0QYV0 167 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 GFRA2O00451 464 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 ZNF18P17022 549 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 CLCN1P35523 988 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 DMWDQ09019 674 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 NR1H3Q13133 447 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 TPD52L1Q16890 204 aaPredicted RBP20.22■□□□□ 0.83
PTCH1-227ENST00000553256 BSPRYQ5W0U4 402 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 CREBRFQ8IUR6 639 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 CLEC4CQ8WTT0 213 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 STK32AQ8WU08 396 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 CDK5RAP1Q96SZ6 601 aaKnown RBP20.22■□□□□ 0.83
PTCH1-227ENST00000553256 LRRC4Q9HBW1 653 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 SPHK2Q9NRA0 654 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 ZSCAN32Q9NX65 697 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 SH3BP1Q9Y3L3 701 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 PCDHGA2Q9Y5H1 932 aa20.22■□□□□ 0.83
PTCH1-227ENST00000553256 EP300Q09472 2414 aaPredicted RBP20.22■□□□□ 0.83
PTCH1-227ENST00000553256 LRRC10BA6NIK2 292 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 FOXN3O00409 490 aaPredicted RBP20.21■□□□□ 0.83
PTCH1-227ENST00000553256 RNF40O75150 1001 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 IRF1P10914 325 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 RALAP11233 206 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 ADH5P11766 374 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 CXCL12P48061 93 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 RGS7P49802 495 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 KRT31Q15323 416 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 FBXO43Q4G163 708 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 KLHDC7AQ5VTJ3 777 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 TMEM110Q86TL2 294 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 FAM217AQ8IXS0 508 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 FAM71AQ8IYT1 594 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 SUMF1Q8NBK3 374 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 IRGQQ8WZA9 623 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 FAM126AQ9BYI3 521 aaPredicted RBP20.21■□□□□ 0.83
PTCH1-227ENST00000553256 POLR3BQ9NW08 1133 aaPredicted RBP20.21■□□□□ 0.83
PTCH1-227ENST00000553256 ANO10Q9NW15 660 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 FANCLQ9NW38 375 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 DNAJC12Q9UKB3 198 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 HCN2Q9UL51 889 aa20.21■□□□□ 0.83
PTCH1-227ENST00000553256 KRT5P13647 590 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 PRKCSHP14314 528 aaPredicted RBP20.2■□□□□ 0.82
PTCH1-227ENST00000553256 EFEMP1Q12805 493 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 TRIP4Q15650 581 aaPredicted RBP20.2■□□□□ 0.82
PTCH1-227ENST00000553256 ARHGAP44Q17R89 818 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 MSANTD2Q6P1R3 559 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 TADA2BQ86TJ2 420 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 MIB1Q86YT6 1006 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 FUCA2Q9BTY2 467 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 NACA2Q9H009 215 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 FBXO10Q9UK96 956 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 PCDHGC3Q9UN70 934 aa20.2■□□□□ 0.82
PTCH1-227ENST00000553256 LETM1O95202 739 aaPredicted RBP20.19■□□□□ 0.82
PTCH1-227ENST00000553256 ADH1CP00326 375 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 PNMA6AP0CW24 399 aaPredicted RBP20.19■□□□□ 0.82
PTCH1-227ENST00000553256 LCP1P13796 627 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 GNA15P30679 374 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 COG7P83436 770 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 GAD2Q05329 585 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 STX1AQ16623 288 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 USP33Q8TEY7 942 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 GANQ9H2C0 597 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 PLCB1Q9NQ66 1216 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 TAB2Q9NYJ8 693 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 MARCH2Q9P0N8 246 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 STOML2Q9UJZ1 356 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 AGO1Q9UL18 857 aaKnown RBP20.19■□□□□ 0.82
PTCH1-227ENST00000553256 FHOD1Q9Y613 1164 aa20.19■□□□□ 0.82
PTCH1-227ENST00000553256 PTPRZ1P23471 2315 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-227ENST00000553256 PIK3R2O00459 728 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 TRIM24O15164 1050 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 PAPSS1O43252 624 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-227ENST00000553256 GFRA3O60609 400 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 IGLV3-27P01718 113 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 KIR2DL1P43626 348 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-227ENST00000553256 TYRO3Q06418 890 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 BEND5Q7L4P6 421 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 SIX6OS1Q8N1H7 587 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 EDEM1Q92611 657 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 NKD2Q969F2 451 aaPredicted RBP20.18■□□□□ 0.82
PTCH1-227ENST00000553256 ABCC13Q9NSE7 274 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 TJP2Q9UDY2 1190 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 LIMA1Q9UHB6 759 aaKnown RBP20.18■□□□□ 0.82
PTCH1-227ENST00000553256 RASAL2Q9UJF2 1139 aa20.18■□□□□ 0.82
PTCH1-227ENST00000553256 CACNG3O60359 315 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 TULP3O75386 442 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 FBXO21O94952 628 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 PENKP01210 267 aaPredicted RBP20.17■□□□□ 0.82
PTCH1-227ENST00000553256 CISD3P0C7P0 127 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 UCHL3P15374 230 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 MYL5Q02045 173 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 EIF4EBP2Q13542 120 aaPredicted RBP20.17■□□□□ 0.82
PTCH1-227ENST00000553256 FYB2Q5VWT5 728 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 BTBD8Q5XKL5 378 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 SASS6Q6UVJ0 657 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 SYT13Q7L8C5 426 aa20.17■□□□□ 0.82
PTCH1-227ENST00000553256 SLC47A2Q86VL8 602 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms