RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 GFRA2O00451 464 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 BEST1O76090 585 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 CCDC130P13994 396 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 CD6P30203 668 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 CASP4P49662 377 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 SNRPFP62306 86 aaKnown RBP17.24■□□□□ 0.35
RAB5C-209ENST00000552162 BIRC3Q13489 604 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 E2F4Q16254 413 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 CCNI2Q6ZMN8 369 aaPredicted RBP17.24■□□□□ 0.35
RAB5C-209ENST00000552162 ACOT1Q86TX2 421 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 BHMTQ93088 406 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 ELMO3Q96BJ8 720 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 ZDHHC5Q9C0B5 715 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 SDCBP2Q9H190 292 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 CCDC86Q9H6F5 360 aaKnown RBP17.24■□□□□ 0.35
RAB5C-209ENST00000552162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.24■□□□□ 0.35
RAB5C-209ENST00000552162 APOBEC2Q9Y235 224 aaKnown RBP17.24■□□□□ 0.35
RAB5C-209ENST00000552162 PTPRBP23467 1997 aa17.24■□□□□ 0.35
RAB5C-209ENST00000552162 ACACAQ13085 2346 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 WASH3PC4AMC7 463 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 SYT1P21579 422 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 ATP5C1P36542 298 aaKnown RBP17.23■□□□□ 0.35
RAB5C-209ENST00000552162 MAP3K7CLP57077 242 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 AMPD3Q01432 767 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 ORC1Q13415 861 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 CUL4AQ13619 759 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 PDZD3Q86UT5 571 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 ZCCHC9Q8N567 271 aaKnown RBP17.23■□□□□ 0.35
RAB5C-209ENST00000552162 SLC2A14Q8TDB8 520 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 CUEDC2Q9H467 287 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 UPF2Q9HAU5 1272 aaKnown RBP17.23■□□□□ 0.35
RAB5C-209ENST00000552162 CSNK1G1Q9HCP0 422 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 CYLDQ9NQC7 956 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 CELSR3Q9NYQ7 3312 aa17.23■□□□□ 0.35
RAB5C-209ENST00000552162 GCN1Q92616 2671 aaKnown RBP17.23■□□□□ 0.35
RAB5C-209ENST00000552162 APC2O95996 2303 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 A0A1B0GTW7 788 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 CYP26A1O43174 497 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 CBFA2T3O75081 653 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 CISD3P0C7P0 127 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 NCAM1P13591 858 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 NCOA4Q13772 614 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 STARD3Q14849 445 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 COL28A1Q2UY09 1125 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 FUT11Q495W5 492 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 GPRIN1Q7Z2K8 1008 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 GLRX5Q86SX6 157 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 C12orf56Q8IXR9 622 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 PLEKHO2Q8TD55 490 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 DHX58Q96C10 678 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 TOE1Q96GM8 510 aaKnown RBP17.22■□□□□ 0.35
RAB5C-209ENST00000552162 PRDM16Q9HAZ2 1276 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 FAM49BQ9NUQ9 324 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 WSB2Q9NYS7 404 aaPredicted RBP17.22■□□□□ 0.35
RAB5C-209ENST00000552162 PLK2Q9NYY3 685 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 USP36Q9P275 1121 aaKnown RBP17.22■□□□□ 0.35
RAB5C-209ENST00000552162 HMGXB4Q9UGU5 601 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 PCOLCE2Q9UKZ9 415 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 NFE2L3Q9Y4A8 694 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 STON1Q9Y6Q2 735 aa17.22■□□□□ 0.35
RAB5C-209ENST00000552162 SMG1Q96Q15 3661 aaKnown RBP17.22■□□□□ 0.35
RAB5C-209ENST00000552162 LRRIQ3A6PVS8 624 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 EXOC3O60645 756 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 SOWAHCQ53LP3 525 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 CNNM4Q6P4Q7 775 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 Q6ZNB5 142 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 METTL3Q86U44 580 aaKnown RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 SLCO6A1Q86UG4 719 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 MDM1Q8TC05 714 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 SETD7Q8WTS6 366 aaKnown RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 DNASE2BQ8WZ79 361 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 JAKMIP2Q96AA8 810 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 GPR174Q9BXC1 333 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 MKRN2Q9H000 416 aaKnown RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 MIR1-1HGQ9H1L0 117 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 IL21RQ9HBE5 538 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 CGNQ9P2M7 1197 aaKnown RBP17.21■□□□□ 0.35
RAB5C-209ENST00000552162 SCML2Q9UQR0 700 aa17.21■□□□□ 0.35
RAB5C-209ENST00000552162 MDM4O15151 490 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 VNN1O95497 513 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 CER1O95813 267 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 FAM200BP0CF97 657 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 ADORA2BP29275 332 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 NDST1P52848 882 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 AP3M2P53677 418 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 EHHADHQ08426 723 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 STK38Q15208 465 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 BMT2Q1RMZ1 405 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 UNC13DQ70J99 1090 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 C12orf29Q8N999 325 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 CADM4Q8NFZ8 388 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 P2RY11Q96G91 374 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 NMUR1Q9HB89 426 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 TFIP11Q9UBB9 837 aaKnown RBP17.2■□□□□ 0.34
RAB5C-209ENST00000552162 DNMT3LQ9UJW3 386 aa17.2■□□□□ 0.34
RAB5C-209ENST00000552162 FBXO10Q9UK96 956 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms