RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CACNA1DQ01668 2161 aa5.77□□□□□ -1.49
HOXB3-213ENST00000552000 ANKRD17O75179 2603 aaKnown RBP5.77□□□□□ -1.49
HOXB3-213ENST00000552000 DOCK9Q9BZ29 2069 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 IGHV1OR15-9A0A0B4J2B8 117 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 A0A1W2PQD8 194 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 E9PMD0 336 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 EFSO43281 561 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 NOL4O94818 638 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 CTDNEP1O95476 244 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 NFICP08651 508 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 OR52Z1P0C646 297 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 ATXN1LP0C7T5 689 aaKnown RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 NID1P14543 1247 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 HDCP19113 662 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 CDK11BP21127 795 aaKnown RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 MUTP22033 750 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 CYP2F1P24903 491 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 MAOBP27338 520 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 GRIA2P42262 883 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 WASP42768 502 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 KIR2DL1P43626 348 aaPredicted RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 SMTNP53814 917 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 RAC1P63000 192 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 ATP2C1P98194 919 aaPredicted RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 TSPY1Q01534 308 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 RAD51AP2Q09MP3 1159 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 RESTQ13127 1097 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 MAPK7Q13164 816 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 DHCR24Q15392 516 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 SAFBQ15424 915 aaKnown RBP eCLIP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 ZNF174Q15697 407 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 ENOX2Q16206 610 aaKnown RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 KIF26BQ2KJY2 2108 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 HSF5Q4G112 596 aaPredicted RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 C8orf86Q6ZUL3 223 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 FILIP1Q7Z7B0 1213 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 GLRX5Q86SX6 157 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 TMEM161BQ8NDZ6 487 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 SPATA18Q8TC71 538 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 WASF1Q92558 559 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 BICD1Q96G01 975 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 DRC1Q96MC2 740 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 PYM1Q9BRP8 204 aaKnown RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 PRORYQ9H606 182 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 KIAA1522Q9P206 1035 aaPredicted RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 UXTQ9UBK9 157 aaPredicted RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 SUSD2Q9UGT4 822 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 DSEQ9UL01 958 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 ARHGAP26Q9UNA1 814 aa5.76□□□□□ -1.49
HOXB3-213ENST00000552000 UTP20O75691 2785 aaKnown RBP5.76□□□□□ -1.49
HOXB3-213ENST00000552000 CKAP5Q14008 2032 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 PRRC2CQ9Y520 2896 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TDRD6O60522 2096 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 ANO9A1A5B4 782 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TBC1D3BA6NDS4 549 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 PYCARD-AS1I3L0S3 204 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 LEFTY2O00292 366 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 PIRO00625 290 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 PFKFB2O60825 505 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 NDUFS2O75306 463 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 FDPSP14324 419 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 HOXB2P14652 356 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 GNSP15586 552 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TCF3P15923 654 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 GABRG2P18507 467 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 PAX3P23760 479 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 ADH7P40394 386 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TNFRSF4P43489 277 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TAF6P49848 677 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 RPL10AP62906 217 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 ZXDBP98169 803 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TMEM132DQ14C87 1099 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 NFE2Q16621 373 aaPredicted RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 CCDC142Q17RM4 750 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 RINT1Q6NUQ1 792 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 ZPBP2Q6X784 338 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 C1orf186Q6ZWK4 172 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 LURAP1LQ8IV03 231 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 SCN4BQ8IWT1 228 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 GALNT15Q8N3T1 639 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 ZCCHC9Q8N567 271 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 ZNF513Q8N8E2 541 aaPredicted RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 FSIP1Q8NA03 581 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 SNX29Q8TEQ0 813 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 MYRFLQ96LU7 910 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 FCRL3Q96P31 734 aaPredicted RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 MDFIQ99750 246 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 MSTO1Q9BUK6 570 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 FAM124BQ9H5Z6 455 aaPredicted RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 IL21RQ9HBE5 538 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 NEUROD4Q9HD90 331 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 CD93Q9NPY3 652 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 PDRG1Q9NUG6 133 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 SMPD4Q9NXE4 827 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 DNM3Q9UQ16 869 aa5.75□□□□□ -1.49
HOXB3-213ENST00000552000 FNDC3AQ9Y2H6 1198 aaKnown RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 MUC22E2RYF6 1773 aaPredicted RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 TP53BP1Q12888 1972 aaPredicted RBP5.75□□□□□ -1.49
HOXB3-213ENST00000552000 NBPF19A0A087WUL8 3843 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms