RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MPLP40238 635 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 CLCN2P51788 898 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 AP2B1P63010 937 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 TAP1Q03518 808 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 EIF2B5Q13144 721 aaKnown RBP4.73□□□□□ -1.65
PTCH1-216ENST00000548379 KCNJ12Q14500 433 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 AASDHQ4L235 1098 aaPredicted RBP4.73□□□□□ -1.65
PTCH1-216ENST00000548379 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 TTC22Q5TAA0 569 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 MSANTD2Q6P1R3 559 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 KLHL17Q6TDP4 642 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 Q6YL49 198 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 PIK3AP1Q6ZUJ8 805 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 MOGAT3Q86VF5 341 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 ANKRD18AQ8IVF6 992 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
PTCH1-216ENST00000548379 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTCH1-216ENST00000548379 C11orf44Q8N8P7 122 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 R3HDM4Q96D70 268 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 FBXL20Q96IG2 436 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 TWSG1Q9GZX9 223 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 EPS8L2Q9H6S3 715 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 GTF2A1LQ9UNN4 478 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 RAPGEF2Q9Y4G8 1499 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 CUL7Q14999 1698 aa4.73□□□□□ -1.65
PTCH1-216ENST00000548379 GRID2IPA4D2P6 1211 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 B9A039 149 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 IRAK2O43187 625 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 CTIFO43310 598 aaKnown RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 NARSO43776 548 aaKnown RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PEX1O43933 1283 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PMPCBO75439 489 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 NXPH3O95157 252 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PRKCBP05771 671 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 CHRM2P08172 466 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 HKR1P10072 659 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 JUPP14923 745 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 ZFXP17010 805 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 MCM5P33992 734 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 ADD2P35612 726 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PBX1P40424 430 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 MTHFSP49914 203 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 POU5F1BQ06416 359 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PTPAQ15257 358 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 TAF5Q15542 800 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 ST3GAL2Q16842 350 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 FBXO47Q5MNV8 452 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 GRHL2Q6ISB3 625 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 Q6ZPA2 131 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PRRT2Q7Z6L0 340 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 HERC6Q8IVU3 1022 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 FSTL5Q8N475 847 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 RP9Q8TA86 221 aaKnown RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 THAP4Q8WY91 577 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 SDCCAG3Q96C92 435 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 UBXN10Q96LJ8 280 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 PRR25Q96S07 402 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 ZNF747Q9BV97 191 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 VPS16Q9H269 839 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 SAYSD1Q9NPB0 183 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 KCNK9Q9NPC2 374 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 SERTAD4Q9NUC0 356 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 KIF17Q9P2E2 1029 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 NKX1-2Q9UD57 310 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 DAPP1Q9UN19 280 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 CNTN6Q9UQ52 1028 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 EPN1Q9Y6I3 576 aaPredicted RBP4.72□□□□□ -1.65
PTCH1-216ENST00000548379 GOLGA3Q08378 1498 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 IQGAP2Q13576 1575 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 HECW2Q9P2P5 1572 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 KIF13AQ9H1H9 1805 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 MAGI3Q5TCQ9 1506 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 DISP1Q96F81 1524 aa4.72□□□□□ -1.65
PTCH1-216ENST00000548379 LOC105369274A0A096LPK9 316 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 LOC102723532A0A0G2JNH3 316 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 ESRRBO95718 433 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 CTGFP29279 349 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 ADRA1BP35368 520 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 EIF4A1P60842 406 aaKnown RBP4.71□□□□□ -1.66
PTCH1-216ENST00000548379 CSHL1Q14406 222 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 TIGD6Q17RP2 521 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 ATPAF1Q5TC12 328 aaPredicted RBP4.71□□□□□ -1.66
PTCH1-216ENST00000548379 RINT1Q6NUQ1 792 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 NFRKBQ6P4R8 1299 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 LVRNQ6Q4G3 990 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 Q6ZWC4 215 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 RAB11FIP2Q7L804 512 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 TRABD2AQ86V40 505 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 OR4N4Q8N0Y3 316 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 WDR60Q8WVS4 1066 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 OVCA2Q8WZ82 227 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 TFAP2BQ92481 460 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 THAP7Q9BT49 309 aaPredicted RBP4.71□□□□□ -1.66
PTCH1-216ENST00000548379 TTPALQ9BTX7 342 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 MMRN2Q9H8L6 949 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 ALG13Q9NP73 1137 aaKnown RBP4.71□□□□□ -1.66
PTCH1-216ENST00000548379 DLL3Q9NYJ7 618 aa4.71□□□□□ -1.66
PTCH1-216ENST00000548379 FOXJ2Q9P0K8 574 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms