RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 DNASE1L3Q13609 305 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 NEDD8Q15843 81 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 NIPAL1Q6NVV3 410 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 FRMD7Q6ZUT3 714 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 USP37Q86T82 979 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 CLIP4Q8N3C7 705 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 FBXW8Q8N3Y1 598 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 SLC15A4Q8N697 577 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 CDRT15Q96T59 188 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 PKP2Q99959 881 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 C20orf27Q9GZN8 174 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 SNX25Q9H3E2 840 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 ZNF696Q9H7X3 374 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 MARCH7Q9H992 704 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 RAB26Q9ULW5 256 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 CORINQ9Y5Q5 1042 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 DNALI1O14645 258 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 TGDSO95455 350 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 ENO3P13929 434 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 CCNG2Q16589 344 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 MSS51Q4VC12 460 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 ZNF394Q53GI3 561 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 SH3GL1Q99961 368 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 FOXP3Q9BZS1 431 aa12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
RBFOX1-208ENST00000547372 COL1A1P02452 1464 aaPredicted RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 TESPA1A2RU30 521 aaPredicted RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 DENND3A2RUS2 1198 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 H3BNX3 289 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 MTA2O94776 668 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 ZNF23P17027 643 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 PPP2R5DQ14738 602 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 RC3H1Q5TC82 1133 aaKnown RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 OGFRL1Q5TC84 451 aaPredicted RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 TMC5Q6UXY8 1006 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 BHLHE22Q8NFJ8 381 aaPredicted RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 GCOM2Q9BZD3 368 aaPredicted RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 NAA50Q9GZZ1 169 aaKnown RBP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 WDR70Q9NW82 654 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 TXNDC16Q9P2K2 825 aa12.33□□□□□ -0.43
RBFOX1-208ENST00000547372 AQP9O43315 295 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 GUCY1B2O75343 617 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 SERPINA6P08185 405 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 GAP43P17677 238 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 GTF2IP78347 998 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 CENPCQ03188 943 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 TCEAL1Q15170 157 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 BCL2A1Q16548 175 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 FAM209AQ5JX71 171 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 FNBP1LQ5T0N5 605 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 SPOPLQ6IQ16 392 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 CHST15Q7LFX5 561 aaPredicted RBP12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 FAM47BQ8NA70 645 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 NEDD1Q8NHV4 660 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 CXorf21Q9HAI6 301 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 ANKRD34BA5PLL1 514 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 ZBTB5O15062 677 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 H6PDO95479 791 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 CD48P09326 243 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 SLC1A1P43005 524 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 PHKG1Q16816 387 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 LGSNQ5TDP6 509 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 C16orf46Q6P387 395 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 TRIM72Q6ZMU5 477 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 TAS2R42Q7RTR8 314 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 POMGNT1Q8WZA1 660 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 ALKBH8Q96BT7 664 aaKnown RBP12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 PI4K2AQ9BTU6 479 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 C1orf112Q9NSG2 853 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 IGSF9Q9P2J2 1179 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
RBFOX1-208ENST00000547372 C10orf71Q711Q0 1435 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 ALOX15BO15296 676 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 FBXO21O94952 628 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 CD19P15391 556 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 PTPN1P18031 435 aaKnown RBP12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 WASHC5Q12768 1159 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 QRICH1Q2TAL8 776 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 ANKRD22Q5VYY1 191 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 SLFN13Q68D06 897 aa12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-208ENST00000547372 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms