RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 GIPC2Q8TF65 315 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 SHC3Q92529 594 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 GCNAQ96QF7 691 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 HHIPQ96QV1 700 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 SPAG5Q96R06 1193 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 GANQ9H2C0 597 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 IFNKQ9P0W0 207 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 UXTQ9UBK9 157 aaPredicted RBP14.12□□□□□ -0.15
RAB5B-203ENST00000546810 FHOD1Q9Y613 1164 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 SETXQ7Z333 2677 aaKnown RBP14.12□□□□□ -0.15
RAB5B-203ENST00000546810 WDFY3Q8IZQ1 3526 aa14.12□□□□□ -0.15
RAB5B-203ENST00000546810 F8VP50 259 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 CDX4O14627 284 aaPredicted RBP14.11□□□□□ -0.15
RAB5B-203ENST00000546810 TEX33O43247 280 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 ATF6P18850 670 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 GNA15P30679 374 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 KLK7P49862 253 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 ZNF132P52740 706 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 PLCB2Q00722 1185 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 GRSF1Q12849 480 aaKnown RBP eCLIP14.11□□□□□ -0.15
RAB5B-203ENST00000546810 UAP1L1Q3KQV9 507 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 ITPRIPL2Q3MIP1 535 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 FSTL4Q6MZW2 842 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 DPY19L2P1Q6NXN4 242 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 TMC8Q8IU68 726 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 ANKRD52Q8NB46 1076 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 NAA15Q9BXJ9 866 aaKnown RBP14.11□□□□□ -0.15
RAB5B-203ENST00000546810 LRRC3Q9BY71 257 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 DUSP16Q9BY84 665 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 CSNK1G1Q9HCP0 422 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 POLR3BQ9NW08 1133 aaPredicted RBP14.11□□□□□ -0.15
RAB5B-203ENST00000546810 OBP2AQ9NY56 170 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 KLK13Q9UKR3 277 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 TSPAN16Q9UKR8 245 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 AKAP13Q12802 2813 aa14.11□□□□□ -0.15
RAB5B-203ENST00000546810 DSPP15924 2871 aaKnown RBP14.1□□□□□ -0.15
RAB5B-203ENST00000546810 RNF225M0QZC1 329 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-203ENST00000546810 FOXN3O00409 490 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-203ENST00000546810 NOL4O94818 638 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 RTN3O95197 1032 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-203ENST00000546810 GBP1P32455 592 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 GPR15P49685 360 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 BCAT1P54687 386 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 MAP3K7CLP57077 242 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 CNGA2Q16280 664 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 GOLGA7BQ2TAP0 167 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 TMEM196Q5HYL7 178 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 C19orf48Q6RUI8 117 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 DENND5BQ6ZUT9 1274 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 PAQR9Q6ZVX9 377 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 PDZD3Q86UT5 571 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 FAM71AQ8IYT1 594 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 NUP93Q8N1F7 819 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 BPIFB1Q8TDL5 484 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 NUP58Q9BVL2 599 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 PNPLA8Q9NP80 782 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 NLRC4Q9NPP4 1024 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 COMMD8Q9NX08 183 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 MAGED2Q9UNF1 606 aaPredicted RBP14.1□□□□□ -0.15
RAB5B-203ENST00000546810 GPSM3Q9Y4H4 160 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 LAMA1P25391 3075 aa14.1□□□□□ -0.15
RAB5B-203ENST00000546810 F8VZ95 297 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 O00370 1275 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 CYP26A1O43174 497 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 THAP12O43422 761 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 RNF40O75150 1001 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 CCDC172P0C7W6 258 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 SETSIPP0DME0 302 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 BRD2P25440 801 aaKnown RBP14.09□□□□□ -0.15
RAB5B-203ENST00000546810 CDC25CP30307 473 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 STAT1P42224 750 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 BST2Q10589 180 aaKnown RBP14.09□□□□□ -0.15
RAB5B-203ENST00000546810 ARHGAP15Q53QZ3 475 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 SDHAF4Q5VUM1 108 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 LCLAT1Q6UWP7 414 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 CLEC20AQ6ZU45 233 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 PROSER1Q86XN7 944 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 TRMT2BQ96GJ1 504 aaKnown RBP14.09□□□□□ -0.15
RAB5B-203ENST00000546810 KCNK16Q96T55 309 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 SMOQ99835 787 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 UBXN6Q9BZV1 441 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 SLC32A1Q9H598 525 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 AJAP1Q9UKB5 411 aaPredicted RBP14.09□□□□□ -0.15
RAB5B-203ENST00000546810 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.09□□□□□ -0.15
RAB5B-203ENST00000546810 DMXL2Q8TDJ6 3036 aa14.09□□□□□ -0.15
RAB5B-203ENST00000546810 GCN1Q92616 2671 aaKnown RBP14.08□□□□□ -0.15
RAB5B-203ENST00000546810 PATE3B3GLJ2 98 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 M0QYV0 167 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 APBB3O95704 486 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 GABRR2P28476 465 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 KRT9P35527 623 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 SOX5P35711 763 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 PPP3CCP48454 512 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 PDE6CP51160 858 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 CACNA2D1P54289 1103 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 MEA1Q16626 185 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 GPR158Q5T848 1215 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 ZNF397Q8NF99 534 aaPredicted RBP14.08□□□□□ -0.16
RAB5B-203ENST00000546810 ZNF606Q8WXB4 792 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms