RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
TROAP-204ENST00000546776 SPTBN5Q9NRC6 3674 aaKnown RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 A0A0U1RQJ8 604 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 C2CD4BA6NLJ0 364 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 YJEFN3A6XGL0 299 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 E7ENQ6 273 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 DPYSL4O14531 572 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 GRAP2O75791 330 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 POU2F2P09086 479 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 NCAM1P13591 858 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 PSMA2P25787 234 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 MAN1A1P33908 653 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 RFC1P35251 1148 aaPredicted RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 SLC1A1P43005 524 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 ZNF143P52747 638 aaPredicted RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 GNG11P61952 73 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 RPL7AP62424 266 aaKnown RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 BSPRYQ5W0U4 402 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 RSRC2Q7L4I2 434 aaKnown RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 DNAJB7Q7Z6W7 309 aaPredicted RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 JOSD2Q8TAC2 188 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 RXFP2Q8WXD0 754 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 ATRIPQ8WXE1 791 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 SLC2A13Q96QE2 648 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 CNPY3Q9BT09 278 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 POMKQ9H5K3 350 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 ASAH2Q9NR71 780 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 BRWD1Q9NSI6 2320 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 OLA1Q9NTK5 396 aaKnown RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 CLIC5Q9NZA1 410 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 GMIPQ9P107 970 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 CHORDC1Q9UHD1 332 aaPredicted RBP11.73□□□□□ -0.53
TROAP-204ENST00000546776 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
TROAP-204ENST00000546776 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 SPOPO43791 374 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
TROAP-204ENST00000546776 RFPL2O75678 378 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 PALMO75781 387 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 PROSCO94903 275 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 GJB6O95452 261 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 ABL1P00519 1130 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 F9P00740 461 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 HMGA1P17096 107 aaKnown RBP11.72□□□□□ -0.53
TROAP-204ENST00000546776 PTPN2P17706 415 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 CDC25CP30307 473 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 GBP1P32455 592 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 PTPN9P43378 593 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 USP46P62068 366 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 MTMR3Q13615 1198 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 TAF5Q15542 800 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 SLC25A52Q3SY17 297 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 DCAF6Q58WW2 860 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 ZNF569Q5MCW4 686 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 RNF135Q8IUD6 432 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 DEFB106AQ8N104 65 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 EMC1Q8N766 993 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 NIPA2Q8N8Q9 360 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 NDRG1Q92597 394 aaKnown RBP11.72□□□□□ -0.53
TROAP-204ENST00000546776 PIWIL1Q96J94 861 aaKnown RBP11.72□□□□□ -0.53
TROAP-204ENST00000546776 DDX23Q9BUQ8 820 aaKnown RBP11.72□□□□□ -0.53
TROAP-204ENST00000546776 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
TROAP-204ENST00000546776 AMFRQ9UKV5 643 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.72□□□□□ -0.53
TROAP-204ENST00000546776 CAPN6Q9Y6Q1 641 aa11.72□□□□□ -0.53
TROAP-204ENST00000546776 VCANP13611 3396 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 CLUHO75153 1309 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 A0A1W2PQH9 124 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 ZNF197O14709 1029 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 CCL16O15467 120 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 DCXO43602 365 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 ZNF500O60304 480 aaPredicted RBP11.71□□□□□ -0.53
TROAP-204ENST00000546776 PAPLNO95428 1278 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 ZDHHC11BP0C7U3 371 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 FLT3P36888 993 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.53
TROAP-204ENST00000546776 SULT1E1P49888 294 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 TUBP50607 506 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.53
TROAP-204ENST00000546776 HADHQ16836 314 aaKnown RBP11.71□□□□□ -0.53
TROAP-204ENST00000546776 HECTD3Q5T447 861 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 SNX30Q5VWJ9 437 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 HFE2Q6ZVN8 426 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 SND1Q7KZF4 910 aaKnown RBP eCLIP11.71□□□□□ -0.53
TROAP-204ENST00000546776 STRADAQ7RTN6 431 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 BHLHA9Q7RTU4 235 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 PEX26Q7Z412 305 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 ZDHHC14Q8IZN3 488 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 ZNF276Q8N554 614 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 MRPS31Q92665 395 aaKnown RBP11.71□□□□□ -0.53
TROAP-204ENST00000546776 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.532e-6■■□□□ 11.4
TROAP-204ENST00000546776 C16orf45Q96MC5 204 aaPredicted RBP11.71□□□□□ -0.53
TROAP-204ENST00000546776 CFAP57Q96MR6 1250 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 CORO1BQ9BR76 489 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 NACA2Q9H009 215 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 CD320Q9NPF0 282 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.71□□□□□ -0.53
TROAP-204ENST00000546776 ZMYM5Q9UJ78 669 aa11.71□□□□□ -0.53
TROAP-204ENST00000546776 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms