RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GLB1LQ6UWU2 654 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 C12orf50Q8NA57 414 aaPredicted RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 HNRNPABQ99729 332 aaKnown RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 C12orf65Q9H3J6 166 aaKnown RBP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 KIF9Q9HAQ2 790 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 SLC38A7Q9NVC3 462 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC38-202ENST00000546386 KIAA1257Q9ULG3 409 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
CCDC38-202ENST00000546386 CCDC78A2IDD5 438 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 KBTBD13C9JR72 458 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 KCNK1O00180 336 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 TMEM63AO94886 807 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 WARSP23381 471 aaKnown RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 L1CAMP32004 1257 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 SLC8A3P57103 927 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 MTMR3Q13615 1198 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 PTK6Q13882 451 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 DSC3Q14574 896 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 BBS9Q3SYG4 887 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 ERMARDQ5T6L9 678 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 OTUD1Q5VV17 481 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 MICALCLQ6ZW33 695 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 LRRC8DQ7L1W4 858 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 TOP6BLQ8N6T0 577 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 CELF6Q96J87 481 aaKnown RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 RNF157Q96PX1 679 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 TXLNGYQ9BZA5 131 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 VPS37BQ9H9H4 285 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 TMBIM4Q9HC24 238 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 MTMR10Q9NXD2 777 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 DDX56Q9NY93 547 aaKnown RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 TADA2AO75478 443 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 APRTP07741 180 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 GABPB1Q06547 395 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 FAM171A1Q5VUB5 890 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 ARHGAP17Q68EM7 881 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 RSPO2Q6UXX9 243 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 KDELC2Q7Z4H8 507 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 IGDCC3Q8IVU1 814 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 ABI1Q8IZP0 508 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 KLF6Q99612 283 aaPredicted RBP12.44□□□□□ -0.42
CCDC38-202ENST00000546386 RAB6BQ9NRW1 208 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 NINJ2Q9NZG7 142 aa12.44□□□□□ -0.42
CCDC38-202ENST00000546386 C9IYK1 514 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 ARVCFO00192 962 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 XPO1O14980 1071 aaKnown RBP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 MCF2LO15068 1137 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 HMBSP08397 361 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 DEUP1Q05D60 604 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 TUSC3Q13454 348 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 SPARCL1Q14515 664 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 PRSS55Q6UWB4 352 aaPredicted RBP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 SLC24A5Q71RS6 500 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 TAX1BP1Q86VP1 789 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 SLC35B2Q8TB61 432 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 MYCBPAPQ8TBZ2 947 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 FNIP1Q8TF40 1166 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 AGAP3Q96P47 875 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 FAM193BQ96PV7 902 aaPredicted RBP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 TRAIPQ9BWF2 469 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 CAPS2Q9BXY5 557 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 CHST12Q9NRB3 414 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC38-202ENST00000546386 SCN5AQ14524 2016 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 USP12O75317 370 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 ITIH2P19823 946 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 MATKP42679 507 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 DMTNQ08495 405 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 AP1B1Q10567 949 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 IRF5Q13568 498 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 LRRC38Q5VT99 294 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 BBS12Q6ZW61 710 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 SLC26A9Q7LBE3 791 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 MREGQ8N565 214 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 ANKRD42Q8N9B4 389 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 GRK7Q8WTQ7 553 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 CPT1BQ92523 772 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 UBP1Q9NZI7 540 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 CHMP2BQ9UQN3 213 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 ATP11BQ9Y2G3 1177 aa12.43□□□□□ -0.42
CCDC38-202ENST00000546386 GOLGA8RI6L899 631 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 IRAK1P51617 712 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 USP46P62068 366 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 NOMO2Q5JPE7 1267 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 RWDD4Q6NW29 188 aaKnown RBP12.42□□□□□ -0.42
CCDC38-202ENST00000546386 RHBDF2Q6PJF5 856 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 KCNT2Q6UVM3 1135 aa12.42□□□□□ -0.42
CCDC38-202ENST00000546386 POLNQ7Z5Q5 900 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms