RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 HECTD3Q5T447 861 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 TSPAN18Q96SJ8 248 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 TKTL2Q9H0I9 626 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 TFR2Q9UP52 801 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 RIPK3Q9Y572 518 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 MRPL42Q9Y6G3 142 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 GTPBP10A4D1E9 387 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 NT5C1B-RDH14C9J2C7 533 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 RARGP13631 454 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 SLC6A3Q01959 620 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 RAD9BQ6WBX8 426 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 CLPBQ9H078 707 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 MRPL46Q9H2W6 279 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 POPDC2Q9HBU9 364 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 TRAF3IP3Q9Y228 551 aa9.33□□□□□ -0.92
MTHFD1-202ENST00000545908 IFRD1O00458 451 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 TBL1XO60907 577 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 GLUD1P00367 558 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CCL5P13501 91 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 SMPD1P17405 629 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 FSTL1Q12841 308 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CENPPQ6IPU0 288 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 MYO1HQ8N1T3 1032 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 KAT2BQ92831 832 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 GBP5Q96PP8 586 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 IARS2Q9NSE4 1012 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 LRP6O75581 1613 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 TISP43B9A030 160 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 RAD51CO43502 376 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 RRM1P23921 792 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ARFIP2P53365 341 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CCZ1BP86790 482 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CCZ1P86791 482 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ZNF268Q14587 947 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 DENND1CQ8IV53 801 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CNPY4Q8N129 248 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CCDC138Q96M89 665 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 NEUROG2Q9H2A3 272 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CDYLQ9Y232 598 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 A0A1B0GUA9 196 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 SOAT2O75908 522 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 NCKAP1LP55160 1127 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 OTUD4Q01804 1114 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 POU4F1Q01851 419 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 EIF2B5Q13144 721 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 PPP2R2DQ66LE6 453 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 KIAA1324Q6UXG2 1013 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ZNF438Q7Z4V0 828 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 DEFB106AQ8N104 65 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ZNF557Q8N988 423 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 KLHL29Q96CT2 875 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 PRMT1Q99873 361 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 PACSIN1Q9BY11 444 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ULBP1Q9BZM6 244 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 SPACA6W5XKT8 324 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 HNRNPCL2B2RXH8 293 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 TREHO43280 583 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 HNRNPCL1O60812 293 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ATP9AO75110 1047 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CLASP2O75122 1294 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 STIP1P31948 543 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 MCOLN2Q8IZK6 566 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 TSEN34Q9BSV6 310 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CDT1Q9H211 546 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 COPS7BQ9H9Q2 264 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 MARCH2Q9P0N8 246 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 A0A0A6YYK5 440 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 NCAM2O15394 837 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CAND2O75155 1236 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CSH1P0DML2 217 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CSH2P0DML3 217 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 PYGBP11216 843 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 PCNAP12004 261 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ABCE1P61221 599 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 NT5DC3Q86UY8 548 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 SLC13A5Q86YT5 568 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 COLGALT1Q8NBJ5 622 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CXorf40AQ8TE69 158 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ZNF606Q8WXB4 792 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 HAS1Q92839 578 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 DNAJC7Q99615 494 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 ZCWPW1Q9H0M4 648 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 CAPN10Q9HC96 672 aa9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 RBM12Q9NTZ6 932 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 DRG1Q9Y295 367 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-202ENST00000545908 NCF1BA6NI72 391 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 NCF1CA8MVU1 366 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 RBAK-RBAKDNI3L0D1 243 aa9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 GYG2O15488 501 aa9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 VPS26AO75436 327 aa9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 SERPINI2O75830 405 aa9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 TRIM16O95361 564 aa9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 NCF1P14598 390 aaPredicted RBP9.31□□□□□ -0.92
MTHFD1-202ENST00000545908 KCNJ1P48048 391 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms