RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 PLEKP08567 350 aaPredicted RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 NUDT17P0C025 328 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 P4HA1P13674 534 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PRKCAP17252 672 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CXCR2P25025 360 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PTPN4P29074 926 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PSMC5P62195 406 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 ERVK-9P63128 1117 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CYP27A1Q02318 531 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PDAP1Q13442 181 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 C16orf72Q14CZ0 275 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TRADDQ15628 312 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 KNOP1Q1ED39 458 aaKnown RBP6.93□□□□□ -1.3
NECAP1-208ENST00000545807 USP41Q3LFD5 358 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CFAP221Q4G0U5 840 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PRAMEF19Q5SWL8 479 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 FAM122CQ6P4D5 195 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 RFWD3Q6PCD5 774 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 POTEHQ6S545 545 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 DSTYKQ6XUX3 929 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 LRRC55Q6ZSA7 311 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 TMC3Q7Z5M5 1100 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 DNAAF5Q86Y56 855 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 DAW1Q8N136 415 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 BBOF1Q8ND07 529 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 APPL2Q8NEU8 664 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 LRRC4CQ9HCJ2 640 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 C8orf4Q9NR00 106 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 KLHL14Q9P2G3 628 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 GPSM3Q9Y4H4 160 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 PCDHA2Q9Y5H9 948 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 AK5Q9Y6K8 562 aa6.93□□□□□ -1.3
NECAP1-208ENST00000545807 AKAP3O75969 853 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 NR3C1P04150 777 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 S100A6P06703 90 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 TFPTP0C1Z6 253 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 FDX1P10109 184 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 PCNAP12004 261 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 CDH2P19022 906 aaPredicted RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 UBA1P22314 1058 aaKnown RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 EEF1GP26641 437 aaKnown RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 EVI2BP34910 448 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 CHN2P52757 468 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 POLGP54098 1239 aaPredicted RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 VCPP55072 806 aaKnown RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 SMARCB1Q12824 385 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MAPRE2Q15555 327 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 HSDL1Q3SXM5 330 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 CST9Q5W186 159 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 NFRKBQ6P4R8 1299 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 WDR59Q6PJI9 974 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 RRAGAQ7L523 313 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 DPP9Q86TI2 863 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 ZNF410Q86VK4 478 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 RIOX2Q8IUF8 465 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 C12orf50Q8NA57 414 aaPredicted RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 CHST13Q8NET6 341 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 GRAMD1AQ96CP6 724 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 VPS35Q96QK1 796 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 EBF3Q9H4W6 596 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MARCH7Q9H992 704 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 EHD2Q9NZN4 543 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 RABGEF1Q9UJ41 708 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 GINS2Q9Y248 185 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 RWDD3Q9Y3V2 267 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 CEPT1Q9Y6K0 416 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MCF2LO15068 1137 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 EXOC3O60645 756 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 LRRN2O75325 713 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 AGTP01019 485 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 GJB1P08034 283 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 OAZ1P54368 228 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 XIAPP98170 497 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 EHHADHQ08426 723 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MOGSQ13724 837 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 ZNF829Q3KNS6 432 aaPredicted RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 SEZ6Q53EL9 994 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 SHEQ5VZ18 495 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 GJB7Q6PEY0 223 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 PPP1R21Q6ZMI0 780 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 CDR2LQ86X02 465 aaPredicted RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 PDSS2Q86YH6 399 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 LRRC71Q8N4P6 559 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 TTC9Q92623 222 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MIPEPQ99797 713 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 PTPN18Q99952 460 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 SELENOSQ9BQE4 189 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 LSM14BQ9BX40 385 aaKnown RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MRPS26Q9BYN8 205 aaKnown RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 MTMR12Q9C0I1 747 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 VPS51Q9UID3 782 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 HAO1Q9UJM8 370 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
NECAP1-208ENST00000545807 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
NECAP1-208ENST00000545807 ANGPTL3Q9Y5C1 460 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms