RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 C2CD4BA6NLJ0 364 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 E7ESA3 106 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 NPTXRO95502 500 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 ZNF143P52747 638 aaPredicted RBP15.61■□□□□ 0.09
USP28-214ENST00000545540 SNX30Q5VWJ9 437 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 UNC5AQ6ZN44 842 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 RGS9BPQ6ZS82 235 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 KIF12Q96FN5 646 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 TTC1Q99614 292 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 THTPAQ9BU02 230 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 VPS11Q9H270 941 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 ZNF358Q9NW07 568 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 GABBR2O75899 941 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 RPL10AP62906 217 aaKnown RBP15.61■□□□□ 0.09
USP28-214ENST00000545540 CDK16Q00536 496 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 ILDR2Q71H61 639 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 NUDCD3Q8IVD9 361 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 INPP5DQ92835 1189 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 KCNG1Q9UIX4 513 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 NME7Q9Y5B8 376 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 B4GALT4O60513 344 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 CCDC22O60826 627 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 USP12O75317 370 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 ZMPSTE24O75844 475 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 PFKMP08237 780 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 OSBPP22059 807 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 PGM1P36871 562 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 NEK3P51956 506 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 TTLL12Q14166 644 aaPredicted RBP15.61■□□□□ 0.09
USP28-214ENST00000545540 PPM1JQ5JR12 505 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 VWA5B1Q5TIE3 1220 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 TTC30AQ86WT1 665 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 DNAJC9Q8WXX5 260 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 C18orf25Q96B23 403 aaPredicted RBP15.61■□□□□ 0.09
USP28-214ENST00000545540 PTCD3Q96EY7 689 aaKnown RBP15.61■□□□□ 0.09
USP28-214ENST00000545540 SYT15Q9BQS2 421 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 FZD8Q9H461 694 aa15.61■□□□□ 0.09
USP28-214ENST00000545540 SOCS7O14512 581 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 LGR5O75473 907 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 ATP5HO75947 161 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 PPP2R5DQ14738 602 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 ZNF618Q5T7W0 954 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 CCDC62Q6P9F0 684 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 SH2D5Q6ZV89 423 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 SLC26A11Q86WA9 606 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 MAB21L3Q8N8X9 362 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 PPP1R14CQ8TAE6 165 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 CNPY3Q9BT09 278 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 FAM49AQ9H0Q0 323 aaPredicted RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 LHX5Q9H2C1 402 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 KLK14Q9P0G3 267 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 CACNG4Q9UBN1 327 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 WDR27A2RRH5 827 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 HMX2A2RU54 273 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 TM9SF1O15321 606 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 ITM2AO43736 263 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 CCDC130P13994 396 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 PITX1P78337 314 aaPredicted RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 KIZQ2M2Z5 673 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 CELF3Q5SZQ8 465 aaKnown RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 CDCA2Q69YH5 1023 aaPredicted RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 FAM131BQ86XD5 332 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 CHST13Q8NET6 341 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 OR6B3Q8NGW1 331 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 SCG3Q8WXD2 468 aaKnown RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 AGAP3Q96P47 875 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 POPDC2Q9HBU9 364 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 PCDH18Q9HCL0 1135 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 G3BP2Q9UN86 482 aaKnown RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 RLFQ13129 1914 aa15.6■□□□□ 0.09
USP28-214ENST00000545540 POLR2AP24928 1970 aaKnown RBP15.6■□□□□ 0.09
USP28-214ENST00000545540 SLC15A5A6NIM6 579 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 PRR5-ARHGAP8B1AHC4 643 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 APOL1O14791 398 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 SMNDC1O75940 238 aaKnown RBP eCLIP15.59■□□□□ 0.09
USP28-214ENST00000545540 PTPN7P35236 360 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 AP3M2P53677 418 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 ARHGAP8P85298 464 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 ZNF772Q68DY9 489 aaPredicted RBP15.59■□□□□ 0.09
USP28-214ENST00000545540 CTU1Q7Z7A3 348 aaKnown RBP15.59■□□□□ 0.09
USP28-214ENST00000545540 RBM15BQ8NDT2 890 aaKnown RBP15.59■□□□□ 0.09
USP28-214ENST00000545540 E2F7Q96AV8 911 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 CCDC124Q96CT7 223 aaKnown RBP15.59■□□□□ 0.09
USP28-214ENST00000545540 BCO2Q9BYV7 579 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 DPP3Q9NY33 737 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 DLGAP2Q9P1A6 1054 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 PSAT1Q9Y617 370 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 LOC100653049A0A140TA62 436 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 RFPL1O75677 317 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 KRT34O76011 436 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 TMEM132DQ14C87 1099 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 TMEM154Q6P9G4 183 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 SKA1Q96BD8 255 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 C12orf42Q96LP6 360 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 CYP4F11Q9HBI6 524 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 PHIPQ8WWQ0 1821 aa15.59■□□□□ 0.09
USP28-214ENST00000545540 LINGO3P0C6S8 592 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms