RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CACNA2D1P54289 1103 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 MAP3K7CLP57077 242 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 SLC8A3P57103 927 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 LRMPQ12912 555 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TAF10Q12962 218 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 ORC1Q13415 861 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 CUL2Q13617 745 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 UBXN2BQ14CS0 331 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 ZNF394Q53GI3 561 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 CT47A1Q5JQC4 288 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TPRG1Q6ZUI0 275 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 PAQR9Q6ZVX9 377 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 FAM114A1Q8IWE2 563 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TRIM59Q8IWR1 403 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 ARL14EPQ8N8R7 260 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TMEM105Q8N8V8 129 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 PJA1Q8NG27 643 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 OVCA2Q8WZ82 227 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 USP13Q92995 863 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 FBXO32Q969P5 355 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 MSANTD3Q96H12 275 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TMEM176AQ96HP8 235 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 TWNKQ96RR1 684 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 CYP2S1Q96SQ9 504 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 DDX23Q9BUQ8 820 aaKnown RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 OSBPL6Q9BZF3 934 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 IRX2Q9BZI1 471 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 FBXO44Q9H4M3 255 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 C8orf33Q9H7E9 229 aaPredicted RBP7.79□□□□□ -1.16
CPSF7-224ENST00000544990 CSNK1G1Q9HCP0 422 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 PNPLA8Q9NP80 782 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 KRT82Q9NSB4 513 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 HMGXB4Q9UGU5 601 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
CPSF7-224ENST00000544990 HELZP42694 1942 aaKnown RBP7.78□□□□□ -1.16
CPSF7-224ENST00000544990 C2orf78A6NCI8 922 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 ZNF840PA6NDX5 716 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 MBD3O95983 291 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 PDGFAP04085 211 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 TCF3P15923 654 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 MAGEA9P43362 315 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 SLC5A3P53794 718 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 RAD23BP54727 409 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 AMPD2Q01433 879 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 CLEC20AQ6ZU45 233 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 BTLAQ7Z6A9 289 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 NLRP8Q86W28 1048 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 CCDC105Q8IYK2 499 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 PPM1KQ8N3J5 372 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 DTWD2Q8NBA8 298 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 SLC4A11Q8NBS3 891 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 SCAMP5Q8TAC9 235 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 WHAMMQ8TF30 809 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 FAM3CQ92520 227 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 RSPRY1Q96DX4 576 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 HSH2DQ96JZ2 352 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 CNOT6LQ96LI5 555 aaKnown RBP7.78□□□□□ -1.16
CPSF7-224ENST00000544990 SMOQ99835 787 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 DUSP16Q9BY84 665 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 FOXQ1Q9C009 403 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 SMG9Q9H0W8 520 aaKnown RBP7.78□□□□□ -1.16
CPSF7-224ENST00000544990 RUBCNLQ9H714 662 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 LTB4R2Q9NPC1 389 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 TLR8Q9NR97 1041 aaKnown RBP7.78□□□□□ -1.16
CPSF7-224ENST00000544990 GKN1Q9NS71 199 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 TMEM30AQ9NV96 361 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 IL37Q9NZH6 218 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 GCNT4Q9P109 453 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 CHORDC1Q9UHD1 332 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-224ENST00000544990 KIAA1257Q9ULG3 409 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 PIAS3Q9Y6X2 628 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 KIF26AQ9ULI4 1882 aaPredicted RBP7.78□□□□□ -1.16
CPSF7-224ENST00000544990 ZDBF2Q9HCK1 2354 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 NCANO14594 1321 aa7.78□□□□□ -1.16
CPSF7-224ENST00000544990 MYO16Q9Y6X6 1858 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 FAM92AA1XBS5 289 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ARNTLO00327 626 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ST8SIA5O15466 376 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 BEST1O76090 585 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 DCNP07585 359 aaKnown RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 VDRP11473 427 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 CD19P15391 556 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ACO1P21399 889 aaKnown RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 CD72P21854 359 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 MTIF2P46199 727 aaKnown RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 IFNAR2P48551 515 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 SLC7A9P82251 487 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 GCNT1Q02742 428 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 RUNX3Q13761 415 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 LBRQ14739 615 aaKnown RBP7.77□□□□□ -1.17
CPSF7-224ENST00000544990 MTF1Q14872 753 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 PDGFRLQ15198 375 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ITPRIPL2Q3MIP1 535 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 DPCR1Q3MIW9 517 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 SGO2Q562F6 1265 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 HECTD3Q5T447 861 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 SNX30Q5VWJ9 437 aa7.77□□□□□ -1.17
CPSF7-224ENST00000544990 ARHGAP17Q68EM7 881 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms