RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 PEX26Q7Z412 305 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SLFN11Q7Z7L1 901 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 ITIH5Q86UX2 942 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SCUBE3Q8IX30 993 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 ZDHHC14Q8IZN3 488 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 ELMOD1Q8N336 334 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 DTWD2Q8NBA8 298 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 OVCA2Q8WZ82 227 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 MCEEQ96PE7 176 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 KLHL5Q96PQ7 755 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SLITRK1Q96PX8 696 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 KCNK16Q96T55 309 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SEPT5Q99719 369 aaPredicted RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 CNPY3Q9BT09 278 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 TUBB2BQ9BVA1 445 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 ULBP1Q9BZM6 244 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 ADAM7Q9H2U9 754 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 PLEKHA4Q9H4M7 779 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 POMKQ9H5K3 350 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 CYP4F11Q9HBI6 524 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 POPDC2Q9HBU9 364 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 METTL5Q9NRN9 209 aaKnown RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 IL37Q9NZH6 218 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 UXTQ9UBK9 157 aaPredicted RBP9.96□□□□□ -0.82
YBX3-215ENST00000544504 AMFRQ9UKV5 643 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 STAP1Q9ULZ2 295 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 TFR2Q9UP52 801 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.96□□□□□ -0.82
YBX3-215ENST00000544504 USP3Q9Y6I4 520 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 CHD6Q8TD26 2715 aa9.96□□□□□ -0.82
YBX3-215ENST00000544504 EP300Q09472 2414 aaPredicted RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 DPYSL4O14531 572 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 TNFRSF10BO14763 440 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 CAPN9O14815 690 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 ADAM12O43184 909 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 BUB1BO60566 1050 aaPredicted RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 PALMO75781 387 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 LTFP02788 710 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 ASGR2P07307 311 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 GPD1P21695 349 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 YWHAQP27348 245 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 RFC1P35251 1148 aaPredicted RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 MTHFRP42898 656 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 PTPN9P43378 593 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 PPP3CCP48454 512 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 ZNF143P52747 638 aaPredicted RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 EPHB3P54753 998 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 MESDQ14696 234 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 DDR2Q16832 855 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 C2CD6Q53TS8 623 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 PLPP4Q5VZY2 271 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 LLGL2Q6P1M3 1020 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 TADA2BQ86TJ2 420 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 MON1AQ86VX9 555 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 DNAAF5Q86Y56 855 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 SLC35F6Q8N357 371 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 PLCD3Q8N3E9 789 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 UBL4BQ8N7F7 174 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 NIPA2Q8N8Q9 360 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 LRRC57Q8N9N7 239 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 TDRD5Q8NAT2 981 aaKnown RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 AUTS2Q8WXX7 1259 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 CASP10Q92851 521 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 FAM149B1Q96BN6 582 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 CDK5RAP1Q96SZ6 601 aaKnown RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 NAPGQ99747 312 aaPredicted RBP9.95□□□□□ -0.82
YBX3-215ENST00000544504 TTLL2Q9BWV7 592 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 OSGEPQ9NPF4 335 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.95□□□□□ -0.82
YBX3-215ENST00000544504 DNAI1Q9UI46 699 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 SALL4Q9UJQ4 1053 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 TMEM59LQ9UK28 342 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 FBXW11Q9UKB1 542 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 SCML2Q9UQR0 700 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 CAPN6Q9Y6Q1 641 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 PATJQ8NI35 1801 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 PLXNA4Q9HCM2 1894 aa9.95□□□□□ -0.82
YBX3-215ENST00000544504 A0A0U1RQJ8 604 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 FAM92AA1XBS5 289 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 CCDC66A2RUB6 948 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 GRID2IPA4D2P6 1211 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 C2CD4BA6NLJ0 364 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 SLC38A8A6NNN8 435 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 TGM5O43548 720 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 PI15O43692 258 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 SPOPO43791 374 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 DAB1O75553 588 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 VNN2O95498 520 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 FGF19O95750 216 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 ABL1P00519 1130 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 F9P00740 461 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 LRG1P02750 347 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 RALAP11233 206 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 PDGFRAP16234 1089 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 PSMA2P25787 234 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 HOXA9P31269 272 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 NOS2P35228 1153 aa9.94□□□□□ -0.82
YBX3-215ENST00000544504 CETN2P41208 172 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms