RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PLXNA3P51805 1871 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 MYO16Q9Y6X6 1858 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 A0A1W2PQH9 124 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 KRT10P13645 584 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 NME3Q13232 169 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 C8orf74Q6P047 294 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 FAM131BQ86XD5 332 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 NMUR1Q9HB89 426 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 EFR3BQ9Y2G0 817 aa31.71■■■□□ 2.67
CCM2-219ENST00000544363 SYNJ2BP-COX16A0A087WUM0 186 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 TEX28O15482 410 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 CD48P09326 243 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 PGFP49763 221 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 CDH6P55285 790 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 PDK2Q15119 407 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 CYP1B1Q16678 543 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 ADAM32Q8TC27 787 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 GIPC2Q8TF65 315 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 FBXO32Q969P5 355 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 SLITRK6Q9H5Y7 841 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 CYP4F11Q9HBI6 524 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 PIGVQ9NUD9 493 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 GPATCH2LQ9NWQ4 482 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 COX16Q9P0S2 106 aa31.7■■■□□ 2.66
CCM2-219ENST00000544363 PLXNA4Q9HCM2 1894 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 SLC38A8A6NNN8 435 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 PHF2O75151 1096 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 TJP3O95049 919 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 F9P00740 461 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 MTMR3Q13615 1198 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 ZC3H12AQ5D1E8 599 aaKnown RBP31.69■■■□□ 2.66
CCM2-219ENST00000544363 KAZNQ674X7 775 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 MAP7D3Q8IWC1 876 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 CCDC185Q8N715 623 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 DQX1Q8TE96 717 aaKnown RBP31.69■■■□□ 2.66
CCM2-219ENST00000544363 FAM204AQ9H8W3 233 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 DDIT4Q9NX09 232 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 GMIPQ9P107 970 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 MAFFQ9ULX9 164 aa31.69■■■□□ 2.66
CCM2-219ENST00000544363 GREB1Q4ZG55 1949 aa31.68■■■□□ 2.66
CCM2-219ENST00000544363 CXCL14O95715 111 aa31.68■■■□□ 2.66
CCM2-219ENST00000544363 TMC7Q7Z402 723 aa31.68■■■□□ 2.66
CCM2-219ENST00000544363 WDR6Q9NNW5 1121 aaKnown RBP31.68■■■□□ 2.66
CCM2-219ENST00000544363 AP4E1Q9UPM8 1137 aa31.68■■■□□ 2.66
CCM2-219ENST00000544363 TARSL2A2RTX5 802 aaKnown RBP31.67■■■□□ 2.66
CCM2-219ENST00000544363 CA8P35219 290 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 ADCY2Q08462 1091 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 KRT81Q14533 505 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 SHHQ15465 462 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 CA9Q16790 459 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 TAC4Q86UU9 113 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 PSTKQ8IV42 348 aaKnown RBP31.67■■■□□ 2.66
CCM2-219ENST00000544363 C12orf50Q8NA57 414 aaPredicted RBP31.67■■■□□ 2.66
CCM2-219ENST00000544363 FAM71BQ8TC56 605 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 MAGOHBQ96A72 148 aaKnown RBP31.67■■■□□ 2.66
CCM2-219ENST00000544363 TTLL2Q9BWV7 592 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 CALN1Q9BXU9 219 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 FZD10Q9ULW2 581 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 CNPP09543 421 aaKnown RBP31.67■■■□□ 2.66
CCM2-219ENST00000544363 CHRNA3P32297 505 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 TAF10Q12962 218 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 DPYSL3Q14195 570 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 DPYSL2Q16555 572 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 VSIG1Q86XK7 387 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 C17orf80Q9BSJ5 609 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 PARD6BQ9BYG5 372 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 PCDH18Q9HCL0 1135 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 ALG13Q9NP73 1137 aaKnown RBP31.67■■■□□ 2.66
CCM2-219ENST00000544363 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.67■■■□□ 2.667e-6■□□□□ 10.1
CCM2-219ENST00000544363 OSER1Q9NX31 292 aa31.67■■■□□ 2.66
CCM2-219ENST00000544363 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP31.67■■■□□ 2.661e-8■■□□□ 13.3
CCM2-219ENST00000544363 GRXCR1A8MXD5 290 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 IGLV3-25P01717 112 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 MYOGP15173 224 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 GBP1P32455 592 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 ELF1P32519 619 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 PSEN1P49768 467 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 MRPS25P82663 173 aaKnown RBP31.66■■■□□ 2.66
CCM2-219ENST00000544363 TCEAL8Q8IYN2 117 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 CCDC26Q8TAB7 109 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 RNF139Q8WU17 664 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 LRRC19Q9H756 370 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 TLR8Q9NR97 1041 aaKnown RBP31.66■■■□□ 2.66
CCM2-219ENST00000544363 YIPF1Q9Y548 306 aa31.66■■■□□ 2.66
CCM2-219ENST00000544363 ZNF638Q14966 1978 aaKnown RBP31.66■■■□□ 2.66
CCM2-219ENST00000544363 C5orf67F2Z3F1 127 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 RAD51CO43502 376 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 L1CAMP32004 1257 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 ALDH1A3P47895 512 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 AIF1P55008 147 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 FAM109BQ6ICB4 259 aaPredicted RBP31.65■■■□□ 2.66
CCM2-219ENST00000544363 SND1Q7KZF4 910 aaKnown RBP eCLIP31.65■■■□□ 2.66
CCM2-219ENST00000544363 SPPL3Q8TCT6 385 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 HDAC7Q8WUI4 952 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 NTAN1Q96AB6 310 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 TCF25Q9BQ70 676 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 SMOC2Q9H3U7 446 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 DHX35Q9H5Z1 703 aaKnown RBP31.65■■■□□ 2.66
CCM2-219ENST00000544363 HOMER3Q9NSC5 361 aa31.65■■■□□ 2.66
CCM2-219ENST00000544363 CLIC5Q9NZA1 410 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms