RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 MYCBPAPQ8TBZ2 947 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 RSC1A1Q92681 617 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 SKA1Q96BD8 255 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 TEPSINQ96N21 525 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 SEC62Q99442 399 aaKnown RBP4.24□□□□□ -1.73
SCFD1-207ENST00000544052 TMEM74BQ9NUR3 256 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 TERF2IPQ9NYB0 399 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 COL15A1P39059 1388 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 ADGRL1O94910 1474 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 ABCA9Q8IUA7 1624 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 RAPGEF6Q8TEU7 1601 aa4.24□□□□□ -1.73
SCFD1-207ENST00000544052 GAGE12BA1L429 117 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 A1L4Q6 167 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 GAGE12HA6NDE8 117 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 VWC2LB2RUY7 222 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 E7EVH7 732 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 SPDEFO95238 335 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 FESP07332 822 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 ATP1A3P13637 1013 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 DRD1P21728 446 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 ACRV1P26436 265 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 PAPOLAP51003 745 aaKnown RBP4.23□□□□□ -1.73
SCFD1-207ENST00000544052 CCR5P51681 352 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 ATXN1P54253 815 aaKnown RBP4.23□□□□□ -1.73
SCFD1-207ENST00000544052 TIRAPP58753 221 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 PDCLQ13371 301 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 SLC12A1Q13621 1099 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 CSHL1Q14406 222 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 DLGAP5Q15398 846 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 GALNTL6Q49A17 601 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 HS1BP3Q53T59 392 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 GRHL2Q6ISB3 625 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 RETSATQ6NUM9 610 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 TMPRSS6Q8IU80 811 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 B3GALNT2Q8NCR0 500 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 IL17DQ8TAD2 202 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 SSH3Q8TE77 659 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 WDR60Q8WVS4 1066 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 HMGB4Q8WW32 186 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 PTCD3Q96EY7 689 aaKnown RBP4.23□□□□□ -1.73
SCFD1-207ENST00000544052 BDH2Q9BUT1 245 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 SMC4Q9NTJ3 1288 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 PCDHB7Q9Y5E2 793 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 MAGI3Q5TCQ9 1506 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 M0QYT0 321 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 MBD4O95243 580 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 TK1P04183 234 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 MTHFSP49914 203 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 TP53BP2Q13625 1128 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 ACOX1Q15067 660 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 SF3B3Q15393 1217 aaKnown RBP4.23□□□□□ -1.73
SCFD1-207ENST00000544052 DPY19L3Q6ZPD9 716 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 PALM2Q8IXS6 379 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 ZNF276Q8N554 614 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 CEP70Q8NHQ1 597 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 SLC22A17Q8WUG5 538 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 EXTL1Q92935 676 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 R3HDM4Q96D70 268 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 LOXL4Q96JB6 756 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 NUDT22Q9BRQ3 303 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 TWSG1Q9GZX9 223 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 GLOD4Q9HC38 313 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 CEP72Q9P209 647 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 DKK3Q9UBP4 350 aa4.23□□□□□ -1.73
SCFD1-207ENST00000544052 C19orf53Q9UNZ5 99 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-207ENST00000544052 ATP10BO94823 1461 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 HOXC11O43248 304 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 CD4P01730 458 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 SERPINA4P29622 427 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 LIPAP38571 399 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 ACTR2P61160 394 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 ADAM17P78536 824 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 MPP1Q00013 466 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 MTAPQ13126 283 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 PRKD1Q15139 912 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TREML2Q5T2D2 321 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 RSRC2Q7L4I2 434 aaKnown RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 RASGRP2Q7LDG7 609 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 GPR149Q86SP6 731 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 DTX2Q86UW9 622 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TTC30AQ86WT1 665 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 SYNE4Q8N205 404 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TOR1AIP2Q8NFQ8 470 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 HTRA1Q92743 480 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 WDYHV1Q96HA8 205 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 SLC26A6Q9BXS9 759 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 KLC2Q9H0B6 622 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 ZHX3Q9H4I2 956 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 DKK2Q9UBU2 259 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TCAF1Q9Y4C2 921 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 RICTORQ6R327 1708 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 NUP153P49790 1475 aaKnown RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 GOLGA3Q08378 1498 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 A6NLC8 198 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 M0QZQ0 153 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 WDR47O94967 919 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 IL6RP08887 468 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 ALADP13716 330 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms