RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PPFIA2O75334 1257 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 ATF2P15336 505 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 CBX1P83916 185 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 ELAVL2Q12926 359 aaKnown RBP20.64■□□□□ 0.9
COPS7A-218ENST00000543939 ZNF280DQ6N043 979 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 FAM131BQ86XD5 332 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 PCDH19Q8TAB3 1148 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 RRN3Q9NYV6 651 aa20.64■□□□□ 0.9
COPS7A-218ENST00000543939 NT5C1B-RDH14C9J2C7 533 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 GRIK1P39086 918 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 ADCY8P40145 1251 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 DEUP1Q05D60 604 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 DHX9Q08211 1270 aaKnown RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 UAP1Q16222 522 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 CFAP58Q5T655 872 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 SLC9A4Q6AI14 798 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 TMEM173Q86WV6 379 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 CCHCR1Q8TD31 782 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 ZBTB9Q96C00 473 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 PGAP3Q96FM1 320 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 KCTD15Q96SI1 283 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 MAGEB5Q9BZ81 275 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 MED4Q9NPJ6 270 aa20.64■□□□□ 0.89
COPS7A-218ENST00000543939 ABI2Q9NYB9 513 aaPredicted RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 MTRF1LQ9UGC7 380 aaKnown RBP20.64■□□□□ 0.89
COPS7A-218ENST00000543939 MYO16Q9Y6X6 1858 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 DGKIO75912 1065 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 UPP2O95045 317 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 SYF2O95926 243 aaKnown RBP20.63■□□□□ 0.89
COPS7A-218ENST00000543939 NCAM1P13591 858 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 OAS2P29728 719 aaKnown RBP20.63■□□□□ 0.89
COPS7A-218ENST00000543939 HSD17B3P37058 310 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 GGCXP38435 758 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 PBX3P40426 434 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 NOMO1Q15155 1222 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 PPP6R3Q5H9R7 873 aaPredicted RBP20.63■□□□□ 0.89
COPS7A-218ENST00000543939 RHBDF2Q6PJF5 856 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 NPNTQ6UXI9 565 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 PRUNE1Q86TP1 453 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 PLD5Q8N7P1 536 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 GLIS1Q8NBF1 620 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 SCAMP5Q8TAC9 235 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 SLC7A14Q8TBB6 771 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 BCL7CQ8WUZ0 217 aaPredicted RBP20.63■□□□□ 0.89
COPS7A-218ENST00000543939 B3GALT6Q96L58 329 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 ZIM3Q96PE6 472 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 SLC9A7Q96T83 725 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 TMEM121Q9BTD3 319 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 PIGVQ9NUD9 493 aa20.63■□□□□ 0.89
COPS7A-218ENST00000543939 ZNF638Q14966 1978 aaKnown RBP20.62■□□□□ 0.89
COPS7A-218ENST00000543939 APOL1O14791 398 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 TBC1D4O60343 1298 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 TGM2P21980 687 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 VPS41P49754 854 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 SLC5A3P53794 718 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 EIF3EP60228 445 aaKnown RBP20.62■□□□□ 0.89
COPS7A-218ENST00000543939 NME3Q13232 169 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 MTMR3Q13615 1198 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 BSPRYQ5W0U4 402 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 VSTM1Q6UX27 236 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 BEND5Q7L4P6 421 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 BBOF1Q8ND07 529 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 P3H4Q92791 437 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 PCDHB5Q9Y5E4 795 aa20.62■□□□□ 0.89
COPS7A-218ENST00000543939 SYNJ2BP-COX16A0A087WUM0 186 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ABHD14A-ACY1A0A1B0GW23 586 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 MCF2LO15068 1137 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 EFEMP2O95967 443 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 TIMP1P01033 207 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 MAGEA11P43364 429 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 LBX1P52954 281 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ITGA8P53708 1063 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 FAM193AP78312 1265 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 CAV1Q03135 178 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 SPDYCQ5MJ68 293 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 SCN4BQ8IWT1 228 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 EDEM1Q92611 657 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 C8orf48Q96LL4 319 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 TRIM62Q9BVG3 475 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 CWH43Q9H720 699 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 PCDH9Q9HC56 1237 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 WDR6Q9NNW5 1121 aaKnown RBP20.61■□□□□ 0.89
COPS7A-218ENST00000543939 COX16Q9P0S2 106 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 KIAA0100Q14667 2235 aaKnown RBP20.61■□□□□ 0.89
COPS7A-218ENST00000543939 PLXNA3P51805 1871 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 TRIM43BA6NCK2 446 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 SGK1O00141 431 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ZSCAN5DPP0CG00 497 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 RBP3P10745 1247 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ETS1P14921 441 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ITGB8P26012 769 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 HSP90B2PQ58FF3 399 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 RTP2Q5QGT7 225 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 TAS1R1Q7RTX1 841 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 PYROXD2Q8N2H3 581 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 ADAM32Q8TC27 787 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 NTAN1Q96AB6 310 aa20.61■□□□□ 0.89
COPS7A-218ENST00000543939 TRIM43Q96BQ3 446 aaPredicted RBP20.61■□□□□ 0.89
COPS7A-218ENST00000543939 CSPG4P5Q96PW8 444 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms