RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 GABBR2O75899 941 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 STC2O76061 302 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 ADH5P11766 374 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 NBL1P41271 181 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 CCR3P51677 355 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 COPB1P53618 953 aaKnown RBP17.03■□□□□ 0.32
CIT-212ENST00000543239 RAPGEF1Q13905 1077 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 PPP2R5DQ14738 602 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 DRAP1Q14919 205 aaPredicted RBP17.03■□□□□ 0.32
CIT-212ENST00000543239 GAB4Q2WGN9 574 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 BSPRYQ5W0U4 402 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 DENND1BQ6P3S1 775 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 Q6ZNB5 142 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 RNF139Q8WU17 664 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 NDRG1Q92597 394 aaKnown RBP17.03■□□□□ 0.32
CIT-212ENST00000543239 DCLK3Q9C098 648 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 HSD3B7Q9H2F3 369 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 SPHK2Q9NRA0 654 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
CIT-212ENST00000543239 LGALS16A8MUM7 142 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 HOXC11O43248 304 aaPredicted RBP17.02■□□□□ 0.32
CIT-212ENST00000543239 SP9P0CG40 484 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
CIT-212ENST00000543239 CLCN1P35523 988 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 OPRD1P41143 372 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 GAD2Q05329 585 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 GAS6Q14393 721 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 LY6G5CQ5SRR4 150 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 CCDC26Q8TAB7 109 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 GOLGA1Q92805 767 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 PLD4Q96BZ4 506 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 SLC4A5Q9BY07 1137 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 LHX5Q9H2C1 402 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
CIT-212ENST00000543239 ST7Q9NRC1 585 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 FAM86C1Q9NVL1 165 aa17.02■□□□□ 0.32
CIT-212ENST00000543239 SMTNL1A8MU46 457 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 PAPSS2O95340 614 aaPredicted RBP17.01■□□□□ 0.31
CIT-212ENST00000543239 EGFP01133 1207 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 LTFP02788 710 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 PDCLQ13371 301 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 NAIF1Q69YI7 327 aaPredicted RBP17.01■□□□□ 0.31
CIT-212ENST00000543239 MSANTD2Q6P1R3 559 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 Q6ZS52 159 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 TMEM110Q86TL2 294 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 FUCA2Q9BTY2 467 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 TRIM62Q9BVG3 475 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 STK33Q9BYT3 514 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 GANQ9H2C0 597 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
CIT-212ENST00000543239 HBS1LQ9Y450 684 aaKnown RBP17.01■□□□□ 0.31
CIT-212ENST00000543239 SLC12A8A0AV02 714 aa17■□□□□ 0.31
CIT-212ENST00000543239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17■□□□□ 0.31
CIT-212ENST00000543239 PROB1E7EW31 1015 aa17■□□□□ 0.31
CIT-212ENST00000543239 F8VZ95 297 aa17■□□□□ 0.31
CIT-212ENST00000543239 PIK3R2O00459 728 aa17■□□□□ 0.31
CIT-212ENST00000543239 ATG13O75143 517 aa17■□□□□ 0.31
CIT-212ENST00000543239 PNMA6AP0CW24 399 aaPredicted RBP17■□□□□ 0.31
CIT-212ENST00000543239 KRT9P35527 623 aa17■□□□□ 0.31
CIT-212ENST00000543239 CXCL12P48061 93 aa17■□□□□ 0.31
CIT-212ENST00000543239 ZNF165P49910 485 aa17■□□□□ 0.31
CIT-212ENST00000543239 CSTF1Q05048 431 aaKnown RBP17■□□□□ 0.31
CIT-212ENST00000543239 ZC3H14Q6PJT7 736 aaKnown RBP17■□□□□ 0.31
CIT-212ENST00000543239 BEND5Q7L4P6 421 aa17■□□□□ 0.31
CIT-212ENST00000543239 APTXQ7Z2E3 356 aaKnown RBP17■□□□□ 0.31
CIT-212ENST00000543239 SLC47A2Q86VL8 602 aa17■□□□□ 0.31
CIT-212ENST00000543239 CLEC4CQ8WTT0 213 aa17■□□□□ 0.31
CIT-212ENST00000543239 EDEM1Q92611 657 aa17■□□□□ 0.31
CIT-212ENST00000543239 NOX5Q96PH1 765 aa17■□□□□ 0.31
CIT-212ENST00000543239 PNKPQ96T60 521 aa17■□□□□ 0.31
CIT-212ENST00000543239 FAM126AQ9BYI3 521 aaPredicted RBP17■□□□□ 0.31
CIT-212ENST00000543239 MIS12Q9H081 205 aa17■□□□□ 0.31
CIT-212ENST00000543239 CYTH4Q9UIA0 394 aa17■□□□□ 0.31
CIT-212ENST00000543239 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
CIT-212ENST00000543239 CEP83Q9Y592 693 aa17■□□□□ 0.31
CIT-212ENST00000543239 CACNA1IQ9P0X4 2223 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 CHURC1-FNTBB4DL54 471 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 E5RJQ4 531 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 KLKB1P03952 638 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 CYP11B1P15538 503 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 CORO1AP31146 461 aaKnown RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 CHKAP35790 457 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 UBXN1Q04323 297 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 SYCP1Q15431 976 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 TRIP4Q15650 581 aaPredicted RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 SKOR2Q2VWA4 1001 aaPredicted RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 PREPLQ4J6C6 727 aaPredicted RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 TMEM25Q86YD3 366 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 FMNL3Q8IVF7 1028 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 SCUBE3Q8IX30 993 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 ETFBKMTQ8IXQ9 262 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 EZH1Q92800 747 aaPredicted RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 NELL1Q92832 810 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 ERGIC2Q96RQ1 377 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 FAM207AQ9NSI2 230 aaPredicted RBP16.99■□□□□ 0.31
CIT-212ENST00000543239 WDR35Q9P2L0 1181 aa16.99■□□□□ 0.31
CIT-212ENST00000543239 SYCE3A1L190 88 aa16.98■□□□□ 0.31
CIT-212ENST00000543239 PAPSS1O43252 624 aaPredicted RBP16.98■□□□□ 0.31
CIT-212ENST00000543239 RNF40O75150 1001 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms