RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 OLFML1Q6UWY5 402 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 REEP2Q9BRK0 252 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 SERPINE1P05121 402 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PROSER3Q2NL68 480 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 TYW3Q6IPR3 259 aaKnown RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PHF20Q9BVI0 1012 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PGM3O95394 542 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PAX7P23759 505 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 CASP4P49662 377 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 CCDC157Q569K6 752 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 SH3RF3Q8TEJ3 882 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 STN1Q9H668 368 aaKnown RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 RNPEPL1Q9HAU8 725 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PDGFCQ9NRA1 345 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 MIER2Q8N344 545 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 GPR101Q96P66 508 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 TPST1O60507 370 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 CRTAMO95727 393 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 FMR1Q06787 632 aaKnown RBP eCLIP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 LAYNQ6UX15 382 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 ZNF624Q9P2J8 865 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 CLOCKO15516 846 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 RAP1GAPP47736 663 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 ZNF605Q86T29 641 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 IRX2Q9BZI1 471 aaPredicted RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PLGRKTQ9HBL7 147 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 TRIM39Q9HCM9 518 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 MCM8Q9UJA3 840 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 ACAT1P24752 427 aaKnown RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PSMD4P55036 377 aaKnown RBP19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PTENP60484 403 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 AHSPQ9NZD4 102 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 NAGPAQ9UK23 515 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 L1RE1Q9UN81 338 aa19.9■□□□□ 0.78
HDAC4-215ENST00000543185 PDHBP11177 359 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 ARL4DP49703 201 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 HIRAP54198 1017 aaPredicted RBP19.89■□□□□ 0.78
HDAC4-215ENST00000543185 PIH1D3Q9NQM4 214 aaKnown RBP19.89■□□□□ 0.78
HDAC4-215ENST00000543185 ZCCHC11Q5TAX3 1644 aaKnown RBP19.89■□□□□ 0.78
HDAC4-215ENST00000543185 CHD1O14646 1710 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 FAM92AA1XBS5 289 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 IL12AP29459 219 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 PIK3C3Q8NEB9 887 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 DUSP12Q9UNI6 340 aa19.89■□□□□ 0.78
HDAC4-215ENST00000543185 CRABP2P29373 138 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 ANKS6Q68DC2 871 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 ABRAXAS1Q6UWZ7 409 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 LPAR1Q92633 364 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 NSMCE2Q96MF7 247 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 MIEF1Q9NQG6 463 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 TSR3Q9UJK0 312 aaKnown RBP19.89■□□□□ 0.77
HDAC4-215ENST00000543185 NR3C2P08235 984 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 PRKAR1AP10644 381 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 RAG1P15918 1043 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 GRK4P32298 578 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 KLHDC7AQ5VTJ3 777 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 APOBEC3FQ8IUX4 373 aaKnown RBP19.89■□□□□ 0.77
HDAC4-215ENST00000543185 IZUMO1Q8IYV9 350 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 CHID1Q9BWS9 393 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 MOCS2O96007 188 aaPredicted RBP19.89■□□□□ 0.77
HDAC4-215ENST00000543185 SWSAP1Q6NVH7 229 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 CRLS1Q9UJA2 301 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 FAM47E-STBD1D6RA91 191 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 ME2P23368 584 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 BNIPLQ7Z465 357 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 DARSP14868 501 aaKnown RBP19.89■□□□□ 0.77
HDAC4-215ENST00000543185 ETFBP38117 255 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 SLC1A6P48664 564 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 DLG4P78352 724 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 DCAF6Q58WW2 860 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 OOSP2Q86WS3 158 aa19.89■□□□□ 0.77
HDAC4-215ENST00000543185 MYL3P08590 195 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 RAB2AP61019 212 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 MAPK11Q15759 364 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 SGO1Q5FBB7 561 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 XKR3Q5GH77 459 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 AKAP14Q86UN6 197 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 TSPAN14Q8NG11 270 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 HAVCR1Q96D42 359 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 KIAA1257Q9ULG3 409 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 R3HDM2Q9Y2K5 976 aaKnown RBP19.88■□□□□ 0.77
HDAC4-215ENST00000543185 HBS1LQ9Y450 684 aaKnown RBP19.88■□□□□ 0.77
HDAC4-215ENST00000543185 SSNA1O43805 119 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 TBC1D12O60347 775 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 UQCRBP14927 111 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 DGKDQ16760 1214 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 ADGRE3Q9BY15 652 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 SUPT7LO94864 414 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 TSPAN19P0C672 248 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 PIK3CGP48736 1102 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 GNA13Q14344 377 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 FBXO42Q6P3S6 717 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 UBP1Q9NZI7 540 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 GNG14A0A1W2PPG7 69 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 Q4G0T1 1027 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 FBXO36Q8NEA4 188 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 ZNF398Q8TD17 642 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 EMILIN2Q9BXX0 1053 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 CCDC154A6NI56 674 aa19.88■□□□□ 0.77
HDAC4-215ENST00000543185 RECQL5O94762 991 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms