RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 MARK1Q9P0L2 795 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
PTPN6-220ENST00000543115 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 NAGPAQ9UK23 515 aa12.69□□□□□ -0.38
PTPN6-220ENST00000543115 LSM7Q9UK45 103 aaKnown RBP12.69□□□□□ -0.38
PTPN6-220ENST00000543115 A0A1W2PQF6 199 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 TULP2O00295 520 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 GABRG2P18507 467 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 PLA2G4AP47712 749 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 DHPSP49366 369 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-220ENST00000543115 MAP7D1Q3KQU3 841 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 COBLL1Q53SF7 1204 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 DCAF17Q5H9S7 520 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-220ENST00000543115 RAB41Q5JT25 222 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 TCERG1LQ5VWI1 586 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 RNF43Q68DV7 783 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 ARHGAP17Q68EM7 881 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 PIGZQ86VD9 579 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 ZNF276Q8N554 614 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 SPATA20Q8TB22 786 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 CD248Q9HCU0 757 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 RMND1Q9NWS8 449 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 PLK2Q9NYY3 685 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 CLIC5Q9NZA1 410 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 BCCIPQ9P287 314 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPN6-220ENST00000543115 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
PTPN6-220ENST00000543115 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
PTPN6-220ENST00000543115 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 SLC16A3O15427 465 aaKnown RBP12.67□□□□□ -0.38
PTPN6-220ENST00000543115 STX10O60499 249 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 CISD3P0C7P0 127 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 HOXB2P14652 356 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 NTSR1P30989 418 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 PTGER3P43115 390 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 PSEN1P49768 467 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 GOLGA8DPQ0D2H9 430 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 EFEMP1Q12805 493 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 N4BP2L1Q5TBK1 243 aaPredicted RBP12.67□□□□□ -0.38
PTPN6-220ENST00000543115 KIAA1211LQ6NV74 962 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 ARMCX6Q7L4S7 300 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 CYP2U1Q7Z449 544 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 TMEFF1Q8IYR6 380 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 PGBD3Q8N328 593 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 DDX1Q92499 740 aaKnown RBP12.67□□□□□ -0.38
PTPN6-220ENST00000543115 NDRG1Q92597 394 aaKnown RBP12.67□□□□□ -0.38
PTPN6-220ENST00000543115 SLC35C1Q96A29 364 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 CCDC34Q96HJ3 373 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 GSDMAQ96QA5 445 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 XPO6Q96QU8 1125 aaKnown RBP12.67□□□□□ -0.38
PTPN6-220ENST00000543115 LSM14BQ9BX40 385 aaKnown RBP12.67□□□□□ -0.38
PTPN6-220ENST00000543115 TMEM74BQ9NUR3 256 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 WDR35Q9P2L0 1181 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 RASAL2Q9UJF2 1139 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 NCOR2Q9Y618 2525 aa12.67□□□□□ -0.38
PTPN6-220ENST00000543115 MYOFQ9NZM1 2061 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 C4orf47A7E2U8 309 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 CDX4O14627 284 aaPredicted RBP12.66□□□□□ -0.38
PTPN6-220ENST00000543115 HMBSP08397 361 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 RALAP11233 206 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 CD44P16070 742 aaKnown RBP12.66□□□□□ -0.38
PTPN6-220ENST00000543115 DGKGP49619 791 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 IRX4P78413 519 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 FKBP3Q00688 224 aaKnown RBP12.66□□□□□ -0.38
PTPN6-220ENST00000543115 LRMPQ12912 555 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 CUL2Q13617 745 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 GOLGA7BQ2TAP0 167 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
PTPN6-220ENST00000543115 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 BHLHA9Q7RTU4 235 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
PTPN6-220ENST00000543115 CHPFQ8IZ52 775 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 TTC39CQ8N584 583 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 UBR7Q8N806 425 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 ANKRD52Q8NB46 1076 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 PIGKQ92643 395 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 SMARCE1Q969G3 411 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 SPACA7Q96KW9 195 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 TSG101Q99816 390 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 UBXN6Q9BZV1 441 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 CACNA2D2Q9NY47 1150 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 TSPAN16Q9UKR8 245 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 RAD54BQ9Y620 910 aa12.66□□□□□ -0.38
PTPN6-220ENST00000543115 ATXN2Q99700 1313 aaKnown RBP12.65□□□□□ -0.38
PTPN6-220ENST00000543115 TPRP12270 2363 aaKnown RBP12.65□□□□□ -0.38
PTPN6-220ENST00000543115 SDK1Q7Z5N4 2213 aa12.65□□□□□ -0.38
PTPN6-220ENST00000543115 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
PTPN6-220ENST00000543115 WASH3PC4AMC7 463 aa12.65□□□□□ -0.38
PTPN6-220ENST00000543115 KHNYNO15037 678 aaKnown RBP12.65□□□□□ -0.38
PTPN6-220ENST00000543115 MAP3K13O43283 966 aa12.65□□□□□ -0.38
PTPN6-220ENST00000543115 KCNK5O95279 499 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms