RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DAAM1Q9Y4D1 1078 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 OVOS2A0A0J9YW53 1432 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 OVOS2Q6IE36 1432 aa6.33□□□□□ -1.4
XRCC4-206ENST00000542685 SPATA31A6Q5VVP1 1343 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 GOLGA6L10A0A0M3HER8 536 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 ANKRD62A6NC57 917 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 B4DLN1 442 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 MASP2O00187 686 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CHL1O00533 1208 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 URI1O94763 535 aaPredicted RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 GHRP10912 638 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 HSPA4P34932 840 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 KRT85P78386 507 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 MRPS35P82673 323 aaKnown RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 MRPS21P82921 87 aaKnown RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 ATP8B2P98198 1209 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 AKAP17AQ02040 695 aaKnown RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC15Q0P6D6 951 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 KRT72Q14CN4 511 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CLPPQ16740 277 aaPredicted RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC142Q17RM4 750 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC181Q5TID7 509 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 EMC10Q5UCC4 262 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 FBXO42Q6P3S6 717 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 Q6ZNX1 250 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 BZW1Q7L1Q6 419 aaKnown RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC65Q8IXS2 484 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CFAP61Q8NHU2 1237 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 RSPH1Q8WYR4 309 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 PTCD3Q96EY7 689 aaKnown RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 FAM81BQ96LP2 452 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 TRAPPC9Q96Q05 1148 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 PRAM1Q96QH2 718 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 IWS1Q96ST2 819 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 RABEP2Q9H5N1 569 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 SLC40A1Q9NP59 571 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 HSFX1Q9UBD0 423 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 NRBP1Q9UHY1 535 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 PEAK1Q9H792 1746 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 LMTK3Q96Q04 1460 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 KDM6AO15550 1401 aaPredicted RBP6.32□□□□□ -1.4
XRCC4-206ENST00000542685 CRB1P82279 1406 aa6.32□□□□□ -1.4
XRCC4-206ENST00000542685 UBN2Q6ZU65 1347 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 USP42Q9H9J4 1324 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 TARSL2A2RTX5 802 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 BECN2A8MW95 431 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 BIRC5O15392 142 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 STX6O43752 255 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 TMCC1O94876 653 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 EPB41P11171 864 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 PHEXP78562 749 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 XRCC4Q13426 336 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 CUL4BQ13620 913 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 ACAP2Q15057 778 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 Q4G0T1 1027 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 CYB5D1Q6P9G0 228 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 TRIM65Q6PJ69 517 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 TSPYL6Q8N831 410 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 C1orf131Q8NDD1 294 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 BCAS4Q8TDM0 211 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 SLC9A6Q92581 669 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 VOPP1Q96AW1 172 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 TTC14Q96N46 770 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 PNKPQ96T60 521 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 AIFM2Q9BRQ8 373 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC28BQ9BUN5 200 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 MAK16Q9BXY0 300 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 CAPS2Q9BXY5 557 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 C11orf54Q9H0W9 315 aaPredicted RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 UNKLQ9H9P5 680 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 ANO10Q9NW15 660 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 BABAM1Q9NWV8 329 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 ATXN10Q9UBB4 475 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 SAP30BPQ9UHR5 308 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 TLK1Q9UKI8 766 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 PAIP2BQ9ULR5 123 aaKnown RBP6.31□□□□□ -1.4
XRCC4-206ENST00000542685 ZNF148Q9UQR1 794 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 ZNF510Q9Y2H8 683 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 C15orf41Q9Y2V0 281 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 KDM3BQ7LBC6 1761 aa6.31□□□□□ -1.4
XRCC4-206ENST00000542685 PCSK5Q92824 1860 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TTC21AQ8NDW8 1320 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 PHRF1Q9P1Y6 1649 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC162PA2VCL2 907 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 LRRD1A4D1F6 860 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CFAP73A6NFT4 308 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TMEM221A6NGB7 291 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TRIM75PA6NK02 468 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 MYO1FO00160 1098 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 NPHP1O15259 732 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 ATP6V1G1O75348 118 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 KRT38O76015 456 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TPPPO94811 219 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 GSTA1P08263 222 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 PDCP20941 246 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 FBLP22087 321 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms