RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 OPTNQ96CV9 577 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 CAPNS2Q96L46 248 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 UBAC1Q9BSL1 405 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 UNKLQ9H9P5 680 aaKnown RBP5.08□□□□□ -1.6
MDM2-228ENST00000542502 KCTD5Q9NXV2 234 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 SAGE1Q9NXZ1 904 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 NYAP2Q9P242 653 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 SCOCQ9UIL1 159 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 ZBTB21Q9ULJ3 1066 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 ZHX2Q9Y6X8 837 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 CEP350Q5VT06 3117 aa5.08□□□□□ -1.6
MDM2-228ENST00000542502 DNAJC9-AS1A6NH13 148 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 RANBP6O60518 1105 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 ULK1O75385 1050 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 PRKD3O94806 890 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 PRSS23O95084 383 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 GH2P01242 217 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 CALM1P0DP23 149 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 CALM2P0DP24 149 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 CALM3P0DP25 149 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 TOP1P11387 765 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 SLC6A2P23975 617 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 ALDH1A3P47895 512 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 GCLCP48506 637 aaPredicted RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 VAV2P52735 878 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 RCAN1P53805 252 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 PER3P56645 1201 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 TFAP4Q01664 338 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 ICA1Q05084 483 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 PRKG1Q13976 671 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 ANKRD1Q15327 319 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 ADRM1Q16186 407 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 VPS53Q5VIR6 699 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 SYNE3Q6ZMZ3 975 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 CCDC129Q6ZRS4 1044 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 ANKRD23Q86SG2 305 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 RASAL3Q86YV0 1011 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 COLGALT2Q8IYK4 626 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 FBXL16Q8N461 479 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 CNTD1Q8N815 330 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 GMCL1P1Q8NEA9 526 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 AUTS2Q8WXX7 1259 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 SMG7Q92540 1137 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 HOXB13Q92826 284 aaPredicted RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 FATE1Q969F0 183 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 ZKSCAN4Q969J2 545 aaPredicted RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 MAP3K14Q99558 947 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 HEPHQ9BQS7 1158 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 TM6SF1Q9BZW5 370 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 MAF1Q9H063 256 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 LSG1Q9H089 658 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 RBM12Q9NTZ6 932 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 MTMR4Q9NYA4 1195 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 HOXC10Q9NYD6 342 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 USP25Q9UHP3 1055 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 G3BP2Q9UN86 482 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.07□□□□□ -1.6
MDM2-228ENST00000542502 MTO1Q9Y2Z2 717 aaKnown RBP5.07□□□□□ -1.6
MDM2-228ENST00000542502 TMX2Q9Y320 296 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 AFG3L2Q9Y4W6 797 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 SSC5DA1L4H1 1573 aa5.07□□□□□ -1.6
MDM2-228ENST00000542502 OTOFQ9HC10 1997 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 MYH4Q9Y623 1939 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 CCDC196A0A1B0GTZ2 297 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 E7EWF7 191 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 WDR46O15213 610 aaKnown RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 PLA2G6O60733 806 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 PARNO95453 639 aaKnown RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 CYP21A2P08686 494 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 CKBP12277 381 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 HOXA7P31268 230 aaPredicted RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 KIF5BP33176 963 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 HSPA4P34932 840 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 COPB2P35606 906 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 LIFRP42702 1097 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 ABCG1P45844 678 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 GNAQP50148 359 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 CCT2P78371 535 aaKnown RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 ITKQ08881 620 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 SPP2Q13103 211 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 MUM1L1Q5H9M0 696 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 GPATCH4Q5T3I0 446 aaKnown RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 ZNF529Q6P280 563 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 BLOC1S2Q6QNY1 142 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 SCARB1Q8WTV0 552 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 CHURC1Q8WUH1 139 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 MTMR8Q96EF0 704 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 C12orf42Q96LP6 360 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 NEK1Q96PY6 1258 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 PARK7Q99497 189 aaKnown RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 LZTS2Q9BRK4 669 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 SENP6Q9GZR1 1112 aaPredicted RBP5.06□□□□□ -1.6
MDM2-228ENST00000542502 KAT14Q9H8E8 782 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 VTA1Q9NP79 307 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 KMT5AQ9NQR1 393 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 FBXO34Q9NWN3 711 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 RNF7Q9UBF6 113 aa5.06□□□□□ -1.6
MDM2-228ENST00000542502 SLC23A1Q9UHI7 598 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms