RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 IPCEF1Q8WWN9 437 aaPredicted RBP4.27□□□□□ -1.73
LEMD3-204ENST00000542032 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 UBA5Q9GZZ9 404 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 SPRTNQ9H040 489 aaPredicted RBP4.27□□□□□ -1.73
LEMD3-204ENST00000542032 NUP62CLQ9H1M0 184 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 KLHL13Q9P2N7 655 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 STEAP1Q9UHE8 339 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 PNMA2Q9UL42 364 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 ASAP1Q9ULH1 1129 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 COMMD10Q9Y6G5 202 aa4.27□□□□□ -1.73
LEMD3-204ENST00000542032 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
LEMD3-204ENST00000542032 GCATO75600 419 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 ANXA2P07355 339 aaKnown RBP4.26□□□□□ -1.73
LEMD3-204ENST00000542032 NTSR1P30989 418 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 COPB1P53618 953 aaKnown RBP4.26□□□□□ -1.73
LEMD3-204ENST00000542032 MTAPQ13126 283 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 STK3Q13188 491 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 LAMB3Q13751 1172 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 KCNAB1Q14722 419 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 ST3GAL2Q16842 350 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 Q4G0T1 1027 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 KSR2Q6VAB6 950 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 KRT28Q7Z3Y7 464 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 DGKHQ86XP1 1220 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 MAFAQ8NHW3 353 aaPredicted RBP4.26□□□□□ -1.73
LEMD3-204ENST00000542032 MAP4K1Q92918 833 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 FCRL4Q96PJ5 515 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 HIST1H2AAQ96QV6 131 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 MAF1Q9H063 256 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 VPS16Q9H269 839 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 TERF2IPQ9NYB0 399 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 DNAJB11Q9UBS4 358 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 ITGB1BP2Q9UKP3 347 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 FZD4Q9ULV1 537 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 SLC27A6Q9Y2P4 619 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 PCDHGB6Q9Y5F9 930 aa4.26□□□□□ -1.73
LEMD3-204ENST00000542032 ZNF521Q96K83 1311 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 A0A087WZ62 844 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 CCDC189A1A4V9 331 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 CLCA1A8K7I4 914 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 SH3BP5O60239 455 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 MBPP02686 304 aaPredicted RBP4.25□□□□□ -1.73
LEMD3-204ENST00000542032 MYL1P05976 194 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 ADRA1DP25100 572 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 NR4A2P43354 598 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 GPC5P78333 572 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 CFHR1Q03591 330 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 DAG1Q14118 895 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 DHX8Q14562 1220 aaKnown RBP4.25□□□□□ -1.73
LEMD3-204ENST00000542032 AWAT1Q58HT5 328 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 C10orf62Q5T681 223 aaPredicted RBP4.25□□□□□ -1.73
LEMD3-204ENST00000542032 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 TMEM65Q6PI78 240 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 DEF8Q6ZN54 512 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 DCDC5Q6ZRR9 648 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 TIFAQ96CG3 184 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 ZCWPW1Q9H0M4 648 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 ZNF212Q9UDV6 495 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 HPSEQ9Y251 543 aa4.25□□□□□ -1.73
LEMD3-204ENST00000542032 SPATA31A1Q5TZJ5 1347 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 DSCR3O14972 297 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 KCNAB3O43448 404 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 KCNQ3O43525 872 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 CBFA2T3O75081 653 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 IL18RAPO95256 599 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 RBL1P28749 1068 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 MMP13P45452 471 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 SRSF1Q07955 248 aaKnown RBP eCLIP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 HDAC1Q13547 482 aaPredicted RBP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 DNASE1L3Q13609 305 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 ZNF268Q14587 947 aaPredicted RBP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 KCNB1Q14721 858 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 ACOX1Q15067 660 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 TMTC4Q5T4D3 741 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 C10orf25Q5T742 122 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 GRHL2Q6ISB3 625 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 RANBP10Q6VN20 620 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 PIP4P1Q86T03 277 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 CNGA4Q8IV77 575 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 SAMD3Q8N6K7 520 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 ZNF366Q8N895 744 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 RNF152Q8N8N0 203 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 C11orf44Q8N8P7 122 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 C16orf52Q8NHV5 167 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 MBD3L2Q8NHZ7 208 aaPredicted RBP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 SUN3Q8TAQ9 357 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 OSR1Q8TAX0 266 aaPredicted RBP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 TTC17Q96AE7 1141 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 WDR24Q96S15 920 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 ELOVL5Q9NYP7 299 aa4.24□□□□□ -1.73
LEMD3-204ENST00000542032 LAS1LQ9Y4W2 734 aaKnown RBP4.24□□□□□ -1.73
LEMD3-204ENST00000542032 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.23□□□□□ -1.73
LEMD3-204ENST00000542032 CLIC1O00299 241 aa4.23□□□□□ -1.73
LEMD3-204ENST00000542032 IFRD1O00458 451 aaPredicted RBP4.23□□□□□ -1.73
LEMD3-204ENST00000542032 AREL1O15033 823 aa4.23□□□□□ -1.73
LEMD3-204ENST00000542032 PLIN1O60240 522 aa4.23□□□□□ -1.73
LEMD3-204ENST00000542032 PRAMEF2O60811 474 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms