RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CLIC1O00299 241 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 RASA4O43374 803 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 USP1O94782 785 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 CDK4P11802 303 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 PBX1P40424 430 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 NEK3P51956 506 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 GPC5P78333 572 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 DNASE1L3Q13609 305 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 PMS2P11Q13670 270 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 LARS2Q15031 903 aaKnown RBP7.1□□□□□ -1.27
YBX3-210ENST00000540975 EZH2Q15910 746 aaKnown RBP7.1□□□□□ -1.27
YBX3-210ENST00000540975 AWAT1Q58HT5 328 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 MTX3Q5HYI7 312 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 DCDC5Q6ZRR9 648 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 KRT73Q86Y46 540 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 GLIS1Q8NBF1 620 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 ZNF398Q8TD17 642 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 HS6ST2Q96MM7 605 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 WDR24Q96S15 920 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 FZD4Q9ULV1 537 aa7.1□□□□□ -1.27
YBX3-210ENST00000540975 WDR91A4D1P6 747 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 TMEM232C9JQI7 657 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 CBFA2T3O75081 653 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 IDEP14735 1019 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 GPS1Q13098 491 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 KCNJ12Q14500 433 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 DAZAP2Q15038 168 aaPredicted RBP7.09□□□□□ -1.27
YBX3-210ENST00000540975 AASDHQ4L235 1098 aaPredicted RBP7.09□□□□□ -1.27
YBX3-210ENST00000540975 IZUMO3Q5VZ72 239 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 ZNF626Q68DY1 528 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 CCSAPQ6IQ19 270 aaPredicted RBP7.09□□□□□ -1.27
YBX3-210ENST00000540975 MIS18BP1Q6P0N0 1132 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 ZNF813Q6ZN06 617 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 OR2C3Q8N628 320 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 PNISRQ8TF01 805 aaKnown RBP7.09□□□□□ -1.27
YBX3-210ENST00000540975 MYD88Q99836 296 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 PDGFCQ9NRA1 345 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 VPS45Q9NRW7 570 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 RGL1Q9NZL6 768 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 FNIP2Q9P278 1114 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
YBX3-210ENST00000540975 ZNF804BA4D1E1 1349 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 SMIM35A0A1B0GVV1 85 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 PRAMEF2O60811 474 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 MST1P26927 711 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 SLC5A2P31639 672 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 TXNL4AP83876 142 aaKnown RBP7.08□□□□□ -1.28
YBX3-210ENST00000540975 MFSD13AQ14CX5 517 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 SLC35G1Q2M3R5 365 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 SUPT20HL1Q3ZLR7 823 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 MAP9Q49MG5 647 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 RANBP10Q6VN20 620 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 P3H2Q8IVL5 708 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.08□□□□□ -1.28
YBX3-210ENST00000540975 ZNF566Q969W8 418 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 EFHD1Q9BUP0 239 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 CINPQ9BW66 212 aaPredicted RBP7.08□□□□□ -1.28
YBX3-210ENST00000540975 SLC29A3Q9BZD2 475 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 SAP30LQ9HAJ7 183 aa7.08□□□□□ -1.28
YBX3-210ENST00000540975 CYP2D7A0A087X1C5 515 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 OR2W5A6NFC9 320 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 FYB1O15117 783 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 ZSCAN9O15535 394 aaPredicted RBP7.07□□□□□ -1.28
YBX3-210ENST00000540975 TMIGD3P0DMS9 266 aaPredicted RBP7.07□□□□□ -1.28
YBX3-210ENST00000540975 EGR1P18146 543 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 EEF1GP26641 437 aaKnown RBP7.07□□□□□ -1.28
YBX3-210ENST00000540975 DGKQP52824 942 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 CCDC15Q0P6D6 951 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 ATP1A4Q13733 1029 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 KCNB1Q14721 858 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 SLC5A9Q2M3M2 681 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 VSTM1Q6UX27 236 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 TNIP3Q96KP6 325 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 NRIP3Q9NQ35 241 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 SEMA5BQ9P283 1151 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 SCAF8Q9UPN6 1271 aaKnown RBP7.07□□□□□ -1.28
YBX3-210ENST00000540975 BTBD3Q9Y2F9 522 aa7.07□□□□□ -1.28
YBX3-210ENST00000540975 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.06□□□□□ -1.28
YBX3-210ENST00000540975 FAM234BA2RU67 622 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 MBPP02686 304 aaPredicted RBP7.06□□□□□ -1.28
YBX3-210ENST00000540975 PECAM1P16284 738 aaPredicted RBP7.06□□□□□ -1.28
YBX3-210ENST00000540975 SFPQP23246 707 aaKnown RBP eCLIP7.06□□□□□ -1.28
YBX3-210ENST00000540975 GALNSP34059 522 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 MAPKAPK3Q16644 382 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 MEX3CQ5U5Q3 659 aaKnown RBP7.06□□□□□ -1.28
YBX3-210ENST00000540975 TLDC1Q6P9B6 456 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 PRSS22Q9GZN4 317 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.06□□□□□ -1.28
YBX3-210ENST00000540975 TMEM8AQ9HCN3 771 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 CEP83Q9Y592 693 aa7.06□□□□□ -1.28
YBX3-210ENST00000540975 INO80B-WBP1J3KQ70 363 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 FCHO1O14526 889 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 HMGB1P09429 215 aaKnown RBP7.05□□□□□ -1.28
YBX3-210ENST00000540975 SLC14A1Q13336 389 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 ARHGAP15Q53QZ3 475 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 TMEM196Q5HYL7 178 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 TMTC4Q5T4D3 741 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 SRLQ86TD4 932 aa7.05□□□□□ -1.28
YBX3-210ENST00000540975 SGCZQ96LD1 299 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms