RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DNAL1Q4LDG9 190 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMEM53Q6P2H8 277 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 LRRC8BQ6P9F7 803 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ANKMY2Q8IV38 441 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 MAP7D3Q8IWC1 876 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 MCOLN2Q8IZK6 566 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 LRRC71Q8N4P6 559 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMCO5AQ8N6Q1 288 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZBTB8BQ8NAP8 495 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 REPS2Q8NFH8 660 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 NLGN2Q8NFZ4 835 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 PRPF31Q8WWY3 499 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 PAFAH2Q99487 392 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ARPC5LQ9BPX5 153 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 EBF3Q9H4W6 596 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ZFYVE28Q9HCC9 887 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 GPAMQ9HCL2 828 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 HSPBP1Q9NZL4 362 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SPTA1P02549 2419 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 A8MU76 341 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TISP43B9A030 160 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TMX2-CTNND1H3BSU7 103 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 GOLGA8RI6L899 631 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 DHX15O43143 795 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 LIASO43766 372 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 FKBP6O75344 327 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 VAV1P15498 845 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 NOP14P78316 857 aaKnown RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 MTM1Q13496 603 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ALCAMQ13740 583 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 EFTUD2Q15029 972 aaKnown RBP eCLIP5.42□□□□□ -1.54
PROM1-220ENST00000540805 C1orf220Q5T0J3 134 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 C1orf146Q5VVC0 180 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 CHSY1Q86X52 802 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 RFX6Q8HWS3 928 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 KATNAL2Q8IYT4 538 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 EFCAB3Q8N7B9 438 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ATP11CQ8NB49 1132 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 OR6Y1Q8NGX8 325 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 PPP1R13LQ8WUF5 828 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 TTC17Q96AE7 1141 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 KLRG1Q96E93 195 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 GLT1D1Q96MS3 346 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 KLF6Q99612 283 aaPredicted RBP5.42□□□□□ -1.54
PROM1-220ENST00000540805 CBWD1Q9BRT8 395 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 NMUR2Q9GZQ4 415 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 KCNK13Q9HB14 408 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ARHGEF4Q9NR80 690 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 ARMCX1Q9P291 453 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 FETUBQ9UGM5 382 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 SHOC2Q9UQ13 582 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 AK5Q9Y6K8 562 aa5.42□□□□□ -1.54
PROM1-220ENST00000540805 EIF3FO00303 357 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 PMM2O15305 246 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ZNF862O60290 1169 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 HUS1O60921 280 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 TM7SF2O76062 418 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 TMCC1O94876 653 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PABPC4LP0CB38 370 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 ZSCAN5DPP0CG00 497 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 MLH1P40692 756 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 HIRAP54198 1017 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 ACTR3P61158 418 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 YWHAGP61981 247 aaKnown RBP eCLIP5.41□□□□□ -1.54
PROM1-220ENST00000540805 HPCAP84074 193 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 MED21Q13503 144 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PRKD1Q15139 912 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 RPS6KA2Q15349 733 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 CEP55Q53EZ4 464 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 DNAJC24Q6P3W2 148 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ADGRD1Q6QNK2 874 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 OTOP1Q7RTM1 612 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 RASSF3Q86WH2 238 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ULK2Q8IYT8 1036 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ZNF276Q8N554 614 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ALLCQ8N6M5 410 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 BANPQ8N9N5 519 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GLIS1Q8NBF1 620 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 RBM15BQ8NDT2 890 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 EXD1Q8NHP7 514 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PLEKHO2Q8TD55 490 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PYROXD1Q8WU10 500 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 AFG1LQ8WV93 481 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 DDX1Q92499 740 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 MTBPQ96DY7 904 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PANX3Q96QZ0 392 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 LXNQ9BS40 222 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 THTPAQ9BU02 230 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 STRA6Q9BX79 667 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 UNC45AQ9H3U1 944 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 NDUFA13Q9P0J0 144 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SUN2Q9UH99 717 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PCSK1NQ9UHG2 260 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 DNPEPQ9ULA0 475 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ADAMTS5Q9UNA0 930 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 NFASCO94856 1347 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SMIM31A0A1B0GVY4 71 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 CSDE1O75534 798 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 MT-ND3P03897 115 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms