RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 IQCDQ96DY2 449 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 EDC3Q96F86 508 aaKnown RBP4.33□□□□□ -1.72
MDM2-227ENST00000540709 ZC3H10Q96K80 434 aaKnown RBP4.33□□□□□ -1.72
MDM2-227ENST00000540709 STRBPQ96SI9 672 aaKnown RBP4.33□□□□□ -1.72
MDM2-227ENST00000540709 TMEM79Q9BSE2 394 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 CINPQ9BW66 212 aaPredicted RBP4.33□□□□□ -1.72
MDM2-227ENST00000540709 NUP62CLQ9H1M0 184 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 SLC25A32Q9H2D1 315 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 PNPLA8Q9NP80 782 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 HEYLQ9NQ87 328 aaPredicted RBP4.33□□□□□ -1.72
MDM2-227ENST00000540709 PRDM11Q9NQV5 511 aa4.33□□□□□ -1.72
MDM2-227ENST00000540709 HEMK1Q9Y5R4 338 aaPredicted RBP4.33□□□□□ -1.72
MDM2-227ENST00000540709 H3BNC9 293 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 THAP12O43422 761 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 HRGP04196 525 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 ANXA2P07355 339 aaKnown RBP4.32□□□□□ -1.72
MDM2-227ENST00000540709 PRF1P14222 555 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 ATF7P17544 494 aaPredicted RBP4.32□□□□□ -1.72
MDM2-227ENST00000540709 ATICP31939 592 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 GALNSP34059 522 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 BFSP2Q13515 415 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 STIM1Q13586 685 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 SEMA5AQ13591 1074 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 GBX1Q14549 363 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 TRIM71Q2Q1W2 868 aaKnown RBP4.32□□□□□ -1.72
MDM2-227ENST00000540709 KLHDC7AQ5VTJ3 777 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 GRHL2Q6ISB3 625 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 ANKRD13BQ86YJ7 626 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.32□□□□□ -1.72
MDM2-227ENST00000540709 C9orf106Q8NAJ2 232 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 BRIP1Q9BX63 1249 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 NUAK2Q9H093 628 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 ZCWPW1Q9H0M4 648 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 PCDHB2Q9Y5E7 798 aa4.32□□□□□ -1.72
MDM2-227ENST00000540709 PROB1E7EW31 1015 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 H3BNX3 289 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 TMEM191BP0C7N4 346 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 TMIGD3P0DMS9 266 aaPredicted RBP4.31□□□□□ -1.72
MDM2-227ENST00000540709 SNHG28P0DPA3 235 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 DRD1P21728 446 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 PBX1P40424 430 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 VPS41P49754 854 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 JAK3P52333 1124 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 COPAP53621 1224 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 FAM110CQ1W6H9 321 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 SLC9C1Q4G0N8 1177 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 KRT73Q86Y46 540 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 FMNL3Q8IVF7 1028 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 CCDC150Q8NCX0 1101 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 ZNF398Q8TD17 642 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 PIGOQ8TEQ8 1089 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 COQ8BQ96D53 544 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 HIC2Q96JB3 615 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 SAP30LQ9HAJ7 183 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 FAM50BQ9Y247 325 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 SQORQ9Y6N5 450 aa4.31□□□□□ -1.72
MDM2-227ENST00000540709 POM121BA6NF01 834 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 KPNA5O15131 536 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 INPPL1O15357 1258 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 CCNT2O60583 730 aaKnown RBP4.3□□□□□ -1.72
MDM2-227ENST00000540709 COQ9O75208 318 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 WDR47O94967 919 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 IL18RAPO95256 599 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 NTN1O95631 604 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 CD63P08962 238 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 RPS13P62277 151 aaKnown RBP4.3□□□□□ -1.72
MDM2-227ENST00000540709 LAMB3Q13751 1172 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 GALEQ14376 348 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 CRTC1Q6UUV9 634 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 ZNF793Q6ZN11 406 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 PIGKQ92643 395 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 PHKBQ93100 1093 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 MSLNLQ96KJ4 702 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 WACQ9BTA9 647 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 UNKQ9C0B0 810 aaKnown RBP4.3□□□□□ -1.72
MDM2-227ENST00000540709 VPS45Q9NRW7 570 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 GJB4Q9NTQ9 266 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 POT1Q9NUX5 634 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 KLHL42Q9P2K6 505 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 HEY2Q9UBP5 337 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 FZD4Q9ULV1 537 aa4.3□□□□□ -1.72
MDM2-227ENST00000540709 PPM1GO15355 546 aaPredicted RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 TLR2O60603 784 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 SLC3A2P08195 630 aaKnown RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 CTSAP10619 480 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 RPL17P18621 184 aaKnown RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 PIK3CBP42338 1070 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 ME1P48163 572 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 WDR5P61964 334 aaKnown RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 RAE1P78406 368 aaKnown RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 GPS1Q13098 491 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 DAG1Q14118 895 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 CLCA4Q14CN2 919 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 CNGA3Q16281 694 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 P3H1Q32P28 736 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.29□□□□□ -1.72
MDM2-227ENST00000540709 NSMCE1Q8WV22 266 aa4.29□□□□□ -1.72
MDM2-227ENST00000540709 TRMT61AQ96FX7 289 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms