RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 CYB561D2O14569 222 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 APOL1O14791 398 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 UGT1A9O60656 530 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 BPGMP07738 259 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 APRTP07741 180 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 AQP5P55064 265 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 C15orf59Q2T9L4 293 aaPredicted RBP12.75□□□□□ -0.37
NPC1-202ENST00000540608 TRMT5Q32P41 509 aaKnown RBP12.75□□□□□ -0.37
NPC1-202ENST00000540608 DNAL1Q4LDG9 190 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 BOLA3Q53S33 107 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 FAM182AQ5T1J6 154 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
NPC1-202ENST00000540608 LRRC71Q8N4P6 559 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 PQLC3Q8N755 202 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 UBA3Q8TBC4 463 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 GATA6Q92908 595 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 HEXIM2Q96MH2 286 aaKnown RBP12.75□□□□□ -0.37
NPC1-202ENST00000540608 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 UGT1A7Q9HAW7 530 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 UGT1A10Q9HAW8 530 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 UGT1A8Q9HAW9 530 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 CYP3A43Q9HB55 503 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 GGA3Q9NZ52 723 aa12.75□□□□□ -0.37
NPC1-202ENST00000540608 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 MAGEA13PA6NCF6 341 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 CIB2O75838 187 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ZBED1O96006 694 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 CXCL8P10145 99 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 BCAR1P56945 870 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 BMPR2Q13873 1038 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 R3HDM1Q15032 1099 aaKnown RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 LY6KQ17RY6 165 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 C11orf91Q3C1V1 193 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 C6orf163Q5TEZ5 329 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 FAXCQ5TGI0 409 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 EEF1DP3Q658K8 133 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 UNC5AQ6ZN44 842 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 TRIM50Q86XT4 487 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 MYLK4Q86YV6 388 aaPredicted RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 C1orf21Q9H246 121 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 R3HDMLQ9H3Y0 253 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 DDX43Q9NXZ2 648 aaKnown RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 HEY1Q9Y5J3 304 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ANK1P16157 1881 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 HMX2A2RU54 273 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ZBTB42B2RXF5 422 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 B4GALT5O43286 388 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 SERPINA6P08185 405 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 NFICP08651 508 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 CSH1P0DML2 217 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 CSH2P0DML3 217 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 TGFB3P10600 412 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 KITP10721 976 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ANPEPP15144 967 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 MAGEA3P43357 314 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ACTR3P61158 418 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 WASHC5Q12768 1159 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 SLC9A4Q6AI14 798 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 OR6B2Q6IFH4 312 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 SLC30A9Q6PML9 568 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 METTL7BQ6UX53 244 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 KBTBD2Q8IY47 623 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 TMEM192Q8IY95 271 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ULK2Q8IYT8 1036 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 NDUFAF2Q8N183 169 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 IFT43Q96FT9 208 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ZNF668Q96K58 619 aaPredicted RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 PANX3Q96QZ0 392 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 SH3GL3Q99963 347 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 C20orf27Q9GZN8 174 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 MIS12Q9H081 205 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 ASCC2Q9H1I8 757 aaPredicted RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 HBS1LQ9Y450 684 aaKnown RBP12.74□□□□□ -0.37
NPC1-202ENST00000540608 WDR90Q96KV7 1748 aa12.74□□□□□ -0.37
NPC1-202ENST00000540608 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 ITGB3P05106 788 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 EDNRBP24530 442 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 ATICP31939 592 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 SERPINB9P50453 376 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 KDSRQ06136 332 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 STX3Q13277 289 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 GSTA3Q16772 222 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 CDO1Q16878 200 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 CCDC14Q49A88 953 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 THEMIS2Q5TEJ8 643 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 TIFABQ6ZNK6 161 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 RIPOR1Q6ZS17 1223 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 FAM183BPQ6ZVS7 135 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 ARCQ7LC44 396 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 CDR2LQ86X02 465 aaPredicted RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 PCDH19Q8TAB3 1148 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 GSDMBQ8TAX9 411 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms